TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 3_CYP1B1_NM_000104 (543 letters) Database: /seqs/databases/ciona/ciona_33.seq 100,000 sequences; 74,629,347 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P614503R.T0/G126P6145... +2 291 8.5e-25 1 scf/ciona01/G126/seq_dir/hrs/G126P614294F.T0/G126P6142... -3 201 5.3e-24 2 scf/ciona01/G126/seq_dir/hrs/G126P613962R.T0/G126P6139... +3 196 7.7e-21 2 scf/ciona01/G126/seq_dir/hrs/G126P610249F.T0/G126P6102... -2 226 1.0e-17 1 scf/ciona01/G126/seq_dir/hrs/G126P607005R.T0/G126P6070... +1 206 1.5e-15 1 scf/ciona01/G126/seq_dir/hrs/G126P614298F.T0/G126P6142... +3 197 1.4e-14 1 scf/ciona01/G126/seq_dir/hrs/G126P614298R.T0/G126P6142... -3 148 2.4e-14 2 scf/ciona01/G126/seq_dir/hrs/G126P612156R.T0/G126P6121... +1 178 1.6e-12 1 scf/ciona01/G126/seq_dir/hrs/G126P612407F.T0/G126P6124... -2 148 2.7e-11 2 scf/ciona01/G126/seq_dir/hrs/G126P614462R.T0/G126P6144... +3 172 8.0e-11 1 scf/ciona01/G126/seq_dir/hrs/G126P614494R.T0/G126P6144... +3 167 7.2e-10 1 scf/ciona01/G126/seq_dir/hrs/G126P612154R.T0/G126P6121... +2 158 3.5e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P613486R.T0/G126P6134... +1 149 7.9e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P614285R.T0/G126P6142... -3 147 1.1e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P610165R.T0/G126P6101... -3 109 2.3e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P612368F.T0/G126P6123... +3 109 2.3e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P610089R.T0/G126P6100... +1 94 7.4e-06 2 scf/ciona01/G126/seq_dir/hrs/G126P610217R.T0/G126P6102... +2 130 1.4e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P614486F.T0/G126P6144... +1 126 3.7e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P613838F.T0/G126P6138... -2 125 5.7e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P614294R.T0/G126P6142... +2 121 0.00016 1 scf/ciona01/G126/seq_dir/hrs/G126P613689R.T0/G126P6136... +2 115 0.00080 1 scf/ciona01/G126/seq_dir/hrs/G126P610264R.T0/G126P6102... +1 93 0.0015 2 scf/ciona01/G126/seq_dir/hrs/G126P612985F.T0/G126P6129... -3 110 0.0027 1 scf/ciona01/G126/seq_dir/hrs/G126P612198F.T0/G126P6121... -3 108 0.0050 1 scf/ciona01/G126/seq_dir/hrs/G126P612198F.T0/G126P6121... -3 108 0.0050 1 scf/ciona01/G126/seq_dir/hrs/G126P610157R.T0/G126P6101... +2 76 0.0057 2 scf/ciona01/G126/seq_dir/hrs/G126P613618R.T0/G126P6136... +2 103 0.018 1 scf/ciona01/G126/seq_dir/hrs/G126P614347R.T0/G126P6143... -1 83 0.038 2 scf/ciona01/G126/seq_dir/hrs/G126P605800R.T0/G126P6058... +3 94 0.085 2 scf/ciona01/G126/seq_dir/hrs/G126P614105R.T0/G126P6141... +1 94 0.19 1 scf/ciona01/G126/seq_dir/hrs/G126P613989F.T0/G126P6139... -1 84 0.24 2 scf/ciona01/G126/seq_dir/hrs/G126P610219F.T0/G126P6102... -3 92 0.27 1 scf/ciona01/G126/seq_dir/hrs/G126P613940F.T0/G126P6139... -1 91 0.41 1 scf/ciona01/G126/seq_dir/hrs/G126P613936R.T0/G126P6139... +3 87 0.68 1 scf/ciona01/G126/seq_dir/hrs/G126P614409F.T0/G126P6144... +2 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P612432R.T0/G126P6124... -1 83 0.95 1 scf/ciona01/G126/seq_dir/hrs/G126P614488R.T0/G126P6144... +2 83 0.96 1 scf/ciona01/G126/seq_dir/hrs/G126P614581R.T0/G126P6145... +1 83 0.96 1 scf/ciona01/G126/seq_dir/hrs/G126P610165F.T0/G126P6101... +1 82 0.99 1 >scf/ciona01/G126/seq_dir/hrs/G126P614503R.T0/G126P614503RF12.T0.seq 682 0 682 ABI Length = 682 Plus Strand HSPs: Score = 291 (102.4 bits), Expect = 8.5e-25, P = 8.5e-25 Identities = 53/162 (32%), Positives = 97/162 (59%), Frame = +2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLA 383 ITD+F A DT++T + W L+ + P++Q ++ AE+ +V G D + + ++PY A Sbjct: 203 ITDLFMAGTDTMATTVHWSLVFLAQNPEIQNKMAAEIIKVTGNDVIN-VSMMESMPYTRA 379 Query: 384 FLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPA 443 +YE+ R P+++ H T++ +V IPK T+V N W++ +DP W NPE+F P Sbjct: 380 VMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPE 559 Query: 444 RFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFIS 485 R + ++G K+ +++ FS+G R C+G +++ F+F++ Sbjct: 560 RHITENGGFTKN--EKIVPFSIGPRFCLGSQMATYHQFIFLA 679 >scf/ciona01/G126/seq_dir/hrs/G126P614294F.T0/G126P614294FB7.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 201 (70.8 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24 Identities = 36/85 (42%), Positives = 56/85 (65%), Frame = -3 Query: 387 EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFL 446 E R VP+++PH ++A+T+++GY IPKDT+V N W ++HD W NP F+P R L Sbjct: 285 EINRMRPNVPLSVPHYSSADTTLMGYRIPKDTIVLTNIWGIHHDEKIWKNPYEFNPERHL 106 Query: 447 DKDGLINKDLTSRVMIFSVGKRRCI 471 D +G K +++VM F++G R C+ Sbjct: 105 DANGNFVK--SNKVMQFNIGLRSCL 37 Score = 108 (38.0 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24 Identities = 20/60 (33%), Positives = 35/60 (58%), Frame = -1 Query: 326 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 385 D+F A DT ++ + W++L +YP+VQ + Q E+D+V+G + M +PY A + Sbjct: 575 DLFIAGTDTTTSTICWIILYLCQYPEVQRKFQEEVDRVLGSSGVLKMAHAEKMPYAKAVI 396 Score = 44 (15.5 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17 Identities = 12/30 (40%), Positives = 17/30 (56%), Frame = -2 Query: 348 RYPDVQTRVQAELDQVVGRDRLPCM-GDQPN 377 RY DV + + + R+ L C+ GDQPN Sbjct: 361 RYSDVVSSIITLSTPKIKRE-LSCLPGDQPN 272 >scf/ciona01/G126/seq_dir/hrs/G126P613962R.T0/G126P613962RH4.T0.seq 702 0 702 ABI Length = 702 Plus Strand HSPs: Score = 196 (69.0 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21 Identities = 40/97 (41%), Positives = 54/97 (55%), Frame = +3 Query: 369 LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVN 428 +P M Q +PY+ AF+ E RF + + IPH T + + GY IPK T V N W V+ Sbjct: 417 VPNMSHQEKMPYLRAFIQEVHRFQTIAVLNIPHCVTEDCILYGYRIPKGTPVMSNIWFVH 596 Query: 429 HDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSV 465 +DP W P+ F P R LD DG ++RV+ FSV Sbjct: 597 NDPAHWQEPQKFRPERHLDGDGKFIP--SNRVIPFSV 701 Score = 83 (29.2 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21 Identities = 13/43 (30%), Positives = 26/43 (60%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 I D+F DT + AL W ++ +P+ Q ++ E++Q++G+ Sbjct: 88 IRDLFVGGIDTTTAALGWGIVCLLNFPECQDKIHQEIEQIIGK 216 >scf/ciona01/G126/seq_dir/hrs/G126P610249F.T0/G126P610249FG4.T0.seq 711 0 711 ABI Length = 711 Minus Strand HSPs: Score = 226 (79.6 bits), Expect = 1.0e-17, P = 1.0e-17 Identities = 48/129 (37%), Positives = 79/129 (61%), Frame = -2 Query: 395 VPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKW-PNPENFDPARFLDKDGL-I 452 +P T+ H T +T++ G+ + KDTV+ N +SV+HDPV W P+P++F P R LD DGL + Sbjct: 647 LPTTMFHKATEDTTIQGFFVAKDTVIMPNIYSVHHDPVTWAPDPDDFRPERHLDDDGLFV 468 Query: 453 NKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPA-KMNFSYGLTI 511 N D V+ FSVG RRC+GE++++ ++F + + +P++ + G I Sbjct: 467 NSD---HVIPFSVGWRRCVGEKIARTEIFAHLVTTFKHFEVDLHPDDVGIDLAGIPGPII 297 Query: 512 KPKSFKVNVTLR 523 +P F+V + R Sbjct: 296 RPARFRVQFSAR 261 >scf/ciona01/G126/seq_dir/hrs/G126P607005R.T0/G126P607005RF11.T0.seq 706 0 706 ABI Length = 706 Plus Strand HSPs: Score = 206 (72.5 bits), Expect = 1.5e-15, P = 1.5e-15 Identities = 50/121 (41%), Positives = 71/121 (58%), Frame = +1 Query: 403 TTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI 462 +T + + GY IPK T V N W V++DP W P+ F P R LD DG ++RV+ Sbjct: 7 STEDCILYGYRIPKGTPVMSNIWFVHNDPAHWQEPQKFRPERHLDGDGKFIP--SNRVIP 180 Query: 463 FSVGKRRCIGEELSKMQLFLFIS-ILAHQCDFRANPNEPAK-MNFSYGLTIK-PKSFKVN 519 FSVG R C+G +L+K +LFLF + +L H +F+ +PN + G T+K PK F V Sbjct: 181 FSVGHRSCLGVQLAKAELFLFYAGVLKHH-EFQVDPNFGLPDWSRDDGGTLKTPKEFTVC 357 Query: 520 VTLR 523 + R Sbjct: 358 IKER 369 >scf/ciona01/G126/seq_dir/hrs/G126P614298F.T0/G126P614298FB1.T0.seq 713 0 713 ABI Length = 713 Plus Strand HSPs: Score = 197 (69.3 bits), Expect = 1.4e-14, P = 1.4e-14 Identities = 42/103 (40%), Positives = 62/103 (60%), Frame = +3 Query: 417 DTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELS 476 D +FVN W+V+++P W P F P R LD G N + V+ FSVG R C+GE+L+ Sbjct: 69 DWQIFVNLWAVHNNPDVWDEPSKFKPERHLDDKG--NFVQSKHVIPFSVGPRHCLGEQLA 242 Query: 477 KMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTIKPKSFKV 518 +M++F+F+ L + +F +P+E P N SYG PK FK+ Sbjct: 243 RMEVFIFLVSLVQKFEFLPDPDEVNLPDIENGSYGPLCAPKPFKM 377 >scf/ciona01/G126/seq_dir/hrs/G126P614298R.T0/G126P614298RC5.T0.seq 706 0 706 ABI Length = 706 Minus Strand HSPs: Score = 148 (52.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14 Identities = 27/55 (49%), Positives = 37/55 (67%), Frame = -3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEE 474 V+ N W ++DPV WP+P FDP R +DKDG N L++ ++ FSVG R C GE+ Sbjct: 179 VYANIWGAHNDPVAWPDPSRFDPYRHIDKDG--NCILSNNIIPFSVGLRSCPGEQ 21 Score = 99 (34.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14 Identities = 23/68 (33%), Positives = 34/68 (50%), Frame = -2 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV-- 420 + G + +P + +P+ A + E MR + VP + H TA V GY IPK T+V Sbjct: 606 ISGPNGVPGSCHKDKMPFTCAVIQETMRCKTVVPTAVQHCATATLEVEGYIIPKGTLVKY 427 Query: 421 FVNQWSVN 428 F + S N Sbjct: 426 FCKKMSQN 403 >scf/ciona01/G126/seq_dir/hrs/G126P612156R.T0/G126P612156RA5.T0.seq 714 0 714 ABI Length = 714 Plus Strand HSPs: Score = 178 (62.7 bits), Expect = 1.6e-12, P = 1.6e-12 Identities = 38/97 (39%), Positives = 54/97 (55%), Frame = +1 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W+V++DPV W P F P R LD DG N V+ FSVG R C+GE+L++M++F+ Sbjct: 277 NLWAVHNDPVVWDEPNKFKPERHLDADG--NFVQLKHVIPFSVGPRHCLGEQLARMEVFI 450 Query: 483 FISILAHQCDFRANPNEPA---KMNFSYGLTIKPKSFKV 518 F+ L + +F +P N S G P FK+ Sbjct: 451 FLVSLVQKFEFLPDPKAKVLSDNENGSSGAAFVPLPFKI 567 >scf/ciona01/G126/seq_dir/hrs/G126P612407F.T0/G126P612407FE7.T0.seq 762 0 762 ABI Length = 762 Minus Strand HSPs: Score = 148 (52.1 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11 Identities = 29/79 (36%), Positives = 47/79 (59%), Frame = -2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W+V+++P W P F P R LD G N + V+ FSVG R C+GE+L++M+ Sbjct: 599 ISTNIWAVHNNPDVWDEPSKFKPERHLDDKG--NFVQSKHVIPFSVGPRHCLGEQLARME 426 Query: 480 LFLFISILAHQCDFRANPN 498 +F F+ L + +F +P+ Sbjct: 425 VFNFLVSLVQKFEFLPDPD 369 Score = 73 (25.7 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11 Identities = 13/30 (43%), Positives = 18/30 (60%), Frame = -3 Query: 391 FSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 F + VP+ +PH T + + GY IPK T V Sbjct: 760 FRTLVPLNVPHKTNKSFDINGYTIPKGTTV 671 >scf/ciona01/G126/seq_dir/hrs/G126P614462R.T0/G126P614462RE2.T0.seq 742 0 742 ABI Length = 742 Plus Strand HSPs: Score = 172 (60.5 bits), Expect = 8.0e-11, P = 8.0e-11 Identities = 31/81 (38%), Positives = 50/81 (61%), Frame = +3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L +++ Sbjct: 450 IISNLWWVHNDPEHWDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGPRNCLGENLPRIE 623 Query: 480 LFLFISILAHQCDFRANPNEP 500 ++LF+ + +C NPN+P Sbjct: 624 IYLFLVSILQKCVVLPNPNDP 686 >scf/ciona01/G126/seq_dir/hrs/G126P614494R.T0/G126P614494RF1.T0.seq 784 0 784 ABI Length = 784 Plus Strand HSPs: Score = 167 (58.8 bits), Expect = 7.2e-10, P = 7.2e-10 Identities = 36/97 (37%), Positives = 54/97 (55%), Frame = +3 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W+V++DP +W P F P R LD G N V+ FSVG R C+GE+L++M++F+ Sbjct: 246 NLWAVHNDPEEWDEPNKFKPERHLDAGG--NFVQLKHVIPFSVGPRHCLGEQLARMEVFI 419 Query: 483 FISILAHQCDFRANPNE---PAKMNFSYGLTIKPKSFKV 518 F+ L + +F +P P N + G P FK+ Sbjct: 420 FLVSLVQKFEFLPDPKATVLPDIENGASGAAYVPLPFKI 536 >scf/ciona01/G126/seq_dir/hrs/G126P612154R.T0/G126P612154RH8.T0.seq 691 0 691 ABI Length = 691 Plus Strand HSPs: Score = 158 (55.6 bits), Expect = 3.5e-09, P = 3.5e-09 Identities = 29/67 (43%), Positives = 41/67 (61%), Frame = +2 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVK 433 D+ LP+V+A + E R SFVP +PHA +T++ GY IP TV+ ++ SVNHD Sbjct: 47 DRSQLPFVMALITEVSRHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVNHDHTL 226 Query: 434 WPNPENF 440 W +P F Sbjct: 227 WDSPGEF 247 >scf/ciona01/G126/seq_dir/hrs/G126P613486R.T0/G126P613486RD10.T0.seq 720 0 720 ABI Length = 720 Plus Strand HSPs: Score = 149 (52.5 bits), Expect = 7.9e-08, P = 7.9e-08 Identities = 44/144 (30%), Positives = 71/144 (49%), Frame = +1 Query: 383 AFLYEAMRFSSFV-P---VTIP---HATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWP 435 ++LY ++F F+ P +P HA ++ P V +N W V++DP + Sbjct: 121 SYLYFNLKFPFFILPSFFCYMPFKGHAIYVALNIPQPFFPHLFKVCINLWGVHNDPCLFD 300 Query: 436 NPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRA 495 P F P R L +DG + + V+ FSVG R C+G +++ M LF + L +F Sbjct: 301 EPGEFRPERHLYEDGKFGR--SDYVIPFSVGPRHCLGHQVASMILFSHLVNLMRNFEFLP 474 Query: 496 NP---NEPAKMNFSYGLTIKPKSFKV 518 +P N P N S G+ P++FK+ Sbjct: 475 DPTAPNLPDITNGSSGILFLPRNFKL 552 >scf/ciona01/G126/seq_dir/hrs/G126P614285R.T0/G126P614285RD1.T0.seq 697 0 697 ABI Length = 697 Minus Strand HSPs: Score = 147 (51.7 bits), Expect = 1.1e-07, P = 1.1e-07 Identities = 31/77 (40%), Positives = 50/77 (64%), Frame = -3 Query: 409 VLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI-FSVGK 467 +L Y I +F N +V+ D W +P FD +R +DKDG K ++SR +I F +G Sbjct: 281 ILFYSICDSHQIFANLHAVHFDKNIWRHPTKFDFSRHIDKDG---KFISSRKVIPFGIGA 111 Query: 468 RRCIGEELSKMQLFLFIS 485 R CIGE++++M++FLF++ Sbjct: 110 RSCIGEKMARMEIFLFVA 57 >scf/ciona01/G126/seq_dir/hrs/G126P610165R.T0/G126P610165RC12.T0.seq 724 0 724 ABI Length = 724 Minus Strand HSPs: Score = 109 (38.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07 Identities = 18/58 (31%), Positives = 33/58 (56%), Frame = -3 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 V G++++P + ++ +PY AF+ E R+ + P + H T + ++ GY IP T V Sbjct: 386 VTGQEKIPAVDNKAYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNGYSIPNGTTV 213 Score = 80 (28.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07 Identities = 13/43 (30%), Positives = 28/43 (65%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 + D+F A +T ++ L+W LL +P+ Q +++ E+ +V+G+ Sbjct: 571 VRDLFFAGSETSTSTLRWTLLCLIHHPEKQEKLRKEIFEVLGK 443 >scf/ciona01/G126/seq_dir/hrs/G126P612368F.T0/G126P612368FB11.T0.seq 727 0 727 ABI Length = 727 Plus Strand HSPs: Score = 109 (38.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07 Identities = 18/58 (31%), Positives = 33/58 (56%), Frame = +3 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 V G++++P + ++ +PY AF+ E R+ + P + H T + ++ GY IP T V Sbjct: 294 VTGQEKIPAVDNKSYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNGYSIPNGTTV 467 Score = 80 (28.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07 Identities = 14/43 (32%), Positives = 27/43 (62%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 + D+F A +T ++ L+W LL +P Q R++ E+ +V+G+ Sbjct: 109 VRDLFFAGSETSTSTLRWTLLCLIHHPKKQERLRKEIFEVLGK 237 >scf/ciona01/G126/seq_dir/hrs/G126P610089R.T0/G126P610089RB2.T0.seq 707 0 707 ABI Length = 707 Plus Strand HSPs: Score = 94 (33.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06 Identities = 14/27 (51%), Positives = 18/27 (66%), Frame = +1 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFL 446 + N W V+HDPV WPNP F+P R + Sbjct: 625 ILSNLWGVHHDPVTWPNPSEFNPNRHI 705 Score = 82 (28.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06 Identities = 17/60 (28%), Positives = 32/60 (53%), Frame = +2 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQ 424 G + +P + +P+ AF+ E+MR+ + VP+ H + + Y IPK T V++ + Sbjct: 152 GANGIPSSILREKMPFTCAFIQESMRYCTVVPMGSQHYCQEDIKIDEYTIPKGTTVWLTK 331 >scf/ciona01/G126/seq_dir/hrs/G126P610217R.T0/G126P610217RG5.T0.seq 715 0 715 ABI Length = 715 Plus Strand HSPs: Score = 130 (45.8 bits), Expect = 1.4e-05, P = 1.4e-05 Identities = 31/88 (35%), Positives = 48/88 (54%), Frame = +2 Query: 436 NPENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELSKMQLFLFISILAHQCDFR 494 +P FDP R +D G K SR +I FS+G R C+GE L++ ++F+F+ + + + Sbjct: 26 HPSQFDPHRLIDDQG---KYRNSRNVIPFSIGPRSCLGEALARQEMFIFLIAILQKYEIN 196 Query: 495 ANPNEPAKMNFSYG-LTIKPKSFKVNVTLR 523 P EP LT P +FK+ +T R Sbjct: 197 PVPGEPLPSLVGINSLTYTPANFKLILTER 286 >scf/ciona01/G126/seq_dir/hrs/G126P614486F.T0/G126P614486FG11.T0.seq 684 0 684 ABI Length = 684 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 3.7e-05, P = 3.7e-05 Identities = 23/68 (33%), Positives = 38/68 (55%), Frame = +1 Query: 318 ENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPN 377 E + + D+F A DT ST + W +L +PDVQ R+ E+D ++ ++ P + + Sbjct: 400 EQLVPLVRDLFMAGTDTSSTTITWAILFLASFPDVQGRIHEEIDTIIEYNQRPSISFEDK 579 Query: 378 LPYVLAFL 385 +PYV A L Sbjct: 580 MPYVRAVL 603 >scf/ciona01/G126/seq_dir/hrs/G126P613838F.T0/G126P613838FE9.T0.seq 733 0 733 ABI Length = 733 Minus Strand HSPs: Score = 125 (44.0 bits), Expect = 5.7e-05, P = 5.7e-05 Identities = 28/83 (33%), Positives = 45/83 (54%), Frame = -2 Query: 437 PENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRAN 496 P F P R LD G N + ++ FSVG R C+GE+L++M++F+++ + + +F + Sbjct: 606 PSKFKPERHLDDKG--NFVQSKHIIPFSVGPRHCVGEQLARMEVFIYLVSMVQKFEFSPD 433 Query: 497 PNE---PAKMNFSYGLTIKPKSFKV 518 PN P S G PK F + Sbjct: 432 PNAADLPDINEGSNGPAFVPKKFDI 358 >scf/ciona01/G126/seq_dir/hrs/G126P614294R.T0/G126P614294RB7.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 121 (42.6 bits), Expect = 0.00016, P = 0.00016 Identities = 34/99 (34%), Positives = 51/99 (51%), Frame = +2 Query: 21 TTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARR 80 T LLL + T H+ R R L +PPGP PL+G +G+ + + ++ Sbjct: 401 TILLLAIVFYLTWHIWNR-----RSPL--SPPGPRGIPLLGAITQLGKHPEHAMMKWNQQ 559 Query: 81 YGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPA 119 YG V +RLG ++VL A H+ALV+ + ADRP+ Sbjct: 560 YGPVCMVRLGPKDVLVLGSFEAAHEALVKN-THMADRPS 673 >scf/ciona01/G126/seq_dir/hrs/G126P613689R.T0/G126P613689RB7.T0.seq 729 0 729 ABI Length = 729 Plus Strand HSPs: Score = 115 (40.5 bits), Expect = 0.00080, P = 0.00080 Identities = 28/78 (35%), Positives = 39/78 (50%), Frame = +2 Query: 343 LLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHA 402 L L T +P + A+ D GRD + + NLPY A L E R + P+ IP Sbjct: 23 LALTTLHPITLSTTYADCDYFKGRDGKLSL--KTNLPYTKAVLQETYRIRTVTPLAIPRR 196 Query: 403 TTANTSVLGYHIPKDTVV 420 T + +++GY IPK T V Sbjct: 197 TRGDVNLMGYFIPKHTEV 250 >scf/ciona01/G126/seq_dir/hrs/G126P610264R.T0/G126P610264RA4.T0.seq 741 0 741 ABI Length = 741 Plus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.0015, Sum P(2) = 0.0015 Identities = 18/57 (31%), Positives = 32/57 (56%), Frame = +1 Query: 364 VGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 + D+ M + +LPY AF++E R+ + P+ +PH T+ + + Y IP+ T V Sbjct: 442 ISGDKDVTMLQKADLPYTSAFIHEVCRYRTIFPLGLPHKTSYDVLLDSYFIPQGTTV 612 Score = 61 (21.5 bits), Expect = 0.0015, Sum P(2) = 0.0015 Identities = 10/28 (35%), Positives = 19/28 (67%), Frame = +3 Query: 339 LQWLLLLFTRYPDVQTRVQAELDQVVGR 366 ++W LL +PD Q +++ E+ +V+GR Sbjct: 18 IRWALLCLLHHPDKQDKMRREIIEVLGR 101 >scf/ciona01/G126/seq_dir/hrs/G126P612985F.T0/G126P612985FF4.T0.seq 699 0 699 ABI Length = 699 Minus Strand HSPs: Score = 110 (38.7 bits), Expect = 0.0027, P = 0.0027 Identities = 26/74 (35%), Positives = 37/74 (50%), Frame = -3 Query: 347 TRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTAN 406 T +P + A+ D GRD + + NLPY A L E R + P+ IP T + Sbjct: 457 TLHPITLSTTYADCDYFKGRDGKLSL--KTNLPYTKAVLQETYRIRTVTPLAIPRRTRGD 284 Query: 407 TSVLGYHIPKDTVV 420 +++GY IPK T V Sbjct: 283 VNLMGYFIPKHTEV 242 >scf/ciona01/G126/seq_dir/hrs/G126P612198F.T0/G126P612198FF3.T0.seq 730 0 730 ABI Length = 730 Minus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0050, P = 0.0050 Identities = 30/104 (28%), Positives = 44/104 (42%), Frame = -3 Query: 312 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC 371 G L L ++ + DT + A+ W + L R+P +Q R+ ELD V G D Sbjct: 344 GRSLSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEELDDVFGGDMGTI 165 Query: 372 MGDQ-PNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIP 415 L + + E++R VP I TT SV + IP Sbjct: 164 TNSHLQKLSLLERTIKESLRMFPSVPF-IGRVTTEECSVGSHSIP 33 >scf/ciona01/G126/seq_dir/hrs/G126P612198F.T0/G126P612198FG3.T0.seq 732 0 732 ABI Length = 732 Minus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0050, P = 0.0050 Identities = 30/104 (28%), Positives = 44/104 (42%), Frame = -3 Query: 312 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPC 371 G L L ++ + DT + A+ W + L R+P +Q R+ ELD V G D Sbjct: 343 GRSLSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGRHPAIQARIHEELDDVFGGDMGTI 164 Query: 372 MGDQ-PNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIP 415 L + + E++R VP I TT SV + IP Sbjct: 163 TNSHLQKLSLLERTIKESLRMFPSVPF-IGRVTTEECSVGSHSIP 32 >scf/ciona01/G126/seq_dir/hrs/G126P610157R.T0/G126P610157RH4.T0.seq 660 0 660 ABI Length = 660 Plus Strand HSPs: Score = 76 (26.8 bits), Expect = 0.0058, Sum P(2) = 0.0057 Identities = 13/33 (39%), Positives = 21/33 (63%), Frame = +2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLI 452 + N ++V++DPV W P FD R +DK+G + Sbjct: 551 ILPNIYAVHNDPVIWTEPSKFDIYRHIDKNGKV 649 Score = 73 (25.7 bits), Expect = 0.0058, Sum P(2) = 0.0057 Identities = 17/48 (35%), Positives = 26/48 (54%), Frame = +1 Query: 373 GDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 GD NLP + AF+ E R + P+ + T + + G+ PK+TVV Sbjct: 325 GD--NLPLLQAFIQELYRCITIAPLGLQRTNTEDVEIGGHLTPKNTVV 462 >scf/ciona01/G126/seq_dir/hrs/G126P613618R.T0/G126P613618RF6.T0.seq 719 0 719 ABI Length = 719 Plus Strand HSPs: Score = 103 (36.3 bits), Expect = 0.018, P = 0.018 Identities = 24/79 (30%), Positives = 46/79 (58%), Frame = +2 Query: 446 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKMN 504 LD +G N + +RV+ FS+G R C+GE L++++++LF+ + + NP++P + Sbjct: 26 LDTNG--NLVMLNRVIPFSIGPRNCLGENLARIEIYLFLVSILQKFVVLPNPDDPNPPIT 199 Query: 505 FSYGLTIKPKSFKVNVTLRE 524 + G P + N+ L+E Sbjct: 200 CNPGAINAPSRY--NIVLKE 253 >scf/ciona01/G126/seq_dir/hrs/G126P614347R.T0/G126P614347RA4.T0.seq 722 0 722 ABI Length = 722 Minus Strand HSPs: Score = 83 (29.2 bits), Expect = 0.039, Sum P(2) = 0.038 Identities = 18/61 (29%), Positives = 30/61 (49%), Frame = -1 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 104 R+ ++ PPGP P +G +G A + + +++YG V +R+G V L I Sbjct: 377 RRPKNYPPGPRGIPFLGVLPFLGNYAERTMHKWSKKYGPVMSVRMGRQDWVFLGDHETIR 198 Query: 105 Q 105 Q Sbjct: 197 Q 195 Score = 58 (20.4 bits), Expect = 0.039, Sum P(2) = 0.038 Identities = 12/36 (33%), Positives = 20/36 (55%), Frame = -3 Query: 106 ALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHW 141 ALV QG++F+ RP A+ ++ G + Y + W Sbjct: 132 ALVNQGNSFSGRPLIATLDQITEGHGIVLLDYGD-W 28 >scf/ciona01/G126/seq_dir/hrs/G126P605800R.T0/G126P605800RF6.T0.seq 715 0 715 ABI Length = 715 Plus Strand HSPs: Score = 94 (33.1 bits), Expect = 0.089, Sum P(2) = 0.085 Identities = 16/56 (28%), Positives = 34/56 (60%), Frame = +3 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAIHQ 105 PPG P++G +G++AH+ F + +R ++G + +R+G +++L+ IH+ Sbjct: 105 PPGLRGVPILGVLPFIGRSAHVKFTKWSRDKFGPIMMVRMGRDDVIILSTYDVIHE 272 Score = 42 (14.8 bits), Expect = 0.089, Sum P(2) = 0.085 Identities = 12/49 (24%), Positives = 23/49 (46%), Frame = +1 Query: 105 QALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 +A V+ +AF RP VSGG + + ++ R+ + + +R Sbjct: 370 KAFVKNMAAFQSRPYMHILAHVSGGYGLILPPFHSNFAQVRQFSLNTLR 516 >scf/ciona01/G126/seq_dir/hrs/G126P614105R.T0/G126P614105RB2.T0.seq 781 0 781 ABI Length = 781 Plus Strand HSPs: Score = 94 (33.1 bits), Expect = 0.21, P = 0.19 Identities = 25/86 (29%), Positives = 47/86 (54%), Frame = +1 Query: 441 DPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRAN--PN 498 D R ++K+G + +V+ F +G R CIGE+L++ +++LF++ + + + + Sbjct: 25 DIYRHINKNG*FVP--SKKVIPFGIGARSCIGEKLAQTEIYLFLANIIKRFEILPDLGSK 198 Query: 499 EPAKMNFSY-GLTIKPKSFKVNVTLRES 525 P +N G P SFKV + +R S Sbjct: 199 HPPPLNDGVTGFAFTPFSFKVVLKIRNS 282 >scf/ciona01/G126/seq_dir/hrs/G126P613989F.T0/G126P613989FF1.T0.seq 699 0 699 ABI Length = 699 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 0.28, Sum P(2) = 0.24 Identities = 14/42 (33%), Positives = 24/42 (57%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A DT S + W + + YPD+QT++ E+ + G Sbjct: 252 VADLFLAGTDTSSNTISWAVSVLLHYPDLQTKLYEEISKKTG 127 Score = 48 (16.9 bits), Expect = 0.28, Sum P(2) = 0.24 Identities = 12/41 (29%), Positives = 20/41 (48%), Frame = -2 Query: 268 FSNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDS 308 F+ F + H +L P D +DAF++ +K + DS Sbjct: 482 FAEFCRAQIEEHQRNLDENE-PTDFIDAFLIEMKKHSPEDS 363 >scf/ciona01/G126/seq_dir/hrs/G126P610219F.T0/G126P610219FF8.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.32, P = 0.27 Identities = 28/99 (28%), Positives = 43/99 (43%), Frame = -3 Query: 7 PNDPWPLNPLSIQQTTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAV 66 P P+ +N L + + +S + V L RR + PPGP PL+G + Sbjct: 501 PQKPFTVNMLQSMMEEINVSISFTFLI-VFLALYYWYRRP-NNFPPGPRGLPLLGVIPFL 328 Query: 67 GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQ 105 G + +++YG V +R+G VVL IHQ Sbjct: 327 GNHPERRMRKWSKKYGPVMSVRMGRQDWVVLGDYDTIHQ 211 >scf/ciona01/G126/seq_dir/hrs/G126P613940F.T0/G126P613940FA3.T0.seq 975 0 975 ABI Length = 975 Minus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.53, P = 0.41 Identities = 19/56 (33%), Positives = 33/56 (58%), Frame = -1 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAIHQ 105 PPG P++G +G++AH A+ +R ++G + +R GS +VVL+ IH+ Sbjct: 291 PPGVRGIPVMGALPYLGKSAHTVMAKWSRDKFGPIMSVRFGSDDVVVLSTYDVIHE 124 >scf/ciona01/G126/seq_dir/hrs/G126P613936R.T0/G126P613936RB12.T0.seq 696 0 696 ABI Length = 696 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.1, P = 0.68 Identities = 17/57 (29%), Positives = 27/57 (47%), Frame = +3 Query: 312 GARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 G L L ++ + DT + A+ W + R+P++Q +V ELD V DR Sbjct: 285 GKTLSLNDIQEEVDTFMFEGHDTTAAAMTWAIYALGRHPEIQKKVHEELDSVFEDDR 455 >scf/ciona01/G126/seq_dir/hrs/G126P614409F.T0/G126P614409FD11.T0.seq 742 0 742 ABI Length = 742 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.6, P = 0.93 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = +2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 347 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 481 >scf/ciona01/G126/seq_dir/hrs/G126P612432R.T0/G126P612432RG1.T0.seq 676 0 676 ABI Length = 676 Minus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.1, P = 0.95 Identities = 17/65 (26%), Positives = 32/65 (49%), Frame = -1 Query: 434 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDF 493 W +P+ F+P RF + + + + FS G R CIG+ + ++ + +S + F Sbjct: 463 WKHPQKFNPDRFTPESASMQNN--HAFIPFSAGPRNCIGQHFAMNEMRVVLSKMLRTFRF 290 Query: 494 RANPN 498 +PN Sbjct: 289 SIDPN 275 >scf/ciona01/G126/seq_dir/hrs/G126P614488R.T0/G126P614488RB9.T0.seq 718 0 718 ABI Length = 718 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.3, P = 0.96 Identities = 13/42 (30%), Positives = 27/42 (64%), Frame = +2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A +T ++ ++W LL YP+ Q +++ E+ +V+G Sbjct: 275 VRDLFEAGTETTTSTIRWALLCMLHYPETQDKLREEIMKVLG 400 >scf/ciona01/G126/seq_dir/hrs/G126P614581R.T0/G126P614581RF8.T0.seq 728 0 728 ABI Length = 728 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.3, P = 0.96 Identities = 13/42 (30%), Positives = 27/42 (64%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A +T ++ ++W LL YP+ Q +++ E+ +V+G Sbjct: 244 VRDLFEAGTETTTSTIRWALLCMLHYPETQDKLREEIMKVLG 369 >scf/ciona01/G126/seq_dir/hrs/G126P610165F.T0/G126P610165FC12.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.2, P = 0.99 Identities = 18/61 (29%), Positives = 30/61 (49%), Frame = +1 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 104 R+ ++ PPGP P +G +G A + + +++YG V +R+G V L I Sbjct: 490 RRPKNYPPGPRGIPFLGVLPFLGNYAERTMHKWSKKYGPVMSVRMGRQDWVFLGDHXTIR 669 Query: 105 Q 105 Q Sbjct: 670 Q 672 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.137 0.417 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 543 543 10. 74 3 13 22 0.064 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_33.seq Title: /seqs/databases/ciona/ciona_33.seq Release date: unknown Posted date: 3:12 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 74,629,347 # of sequences in database: 100,000 # of database sequences satisfying E: 40 No. of states in DFA: 545 (58 KB) Total size of DFA: 104 KB (128 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 12.53u 0.15s 12.68t Elapsed: 00:00:17 Total cpu time: 12.58u 0.16s 12.74t Elapsed: 00:00:19 Start: Mon Apr 1 22:00:27 2002 End: Mon Apr 1 22:00:46 2002