TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 3_CYP1B1_NM_000104 (543 letters) Database: /seqs/databases/ciona/ciona_31.seq 100,000 sequences; 74,399,752 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P612190R.T0/G126P6121... -3 280 1.4e-23 1 scf/ciona01/G126/seq_dir/hrs/G126P613785R.T0/G126P6137... -3 260 2.0e-21 1 scf/ciona01/G126/seq_dir/hrs/G126P613174F.T0/G126P6131... -3 236 6.3e-21 2 scf/ciona01/G126/seq_dir/hrs/G126P612075F.T0/G126P6120... +1 232 2.2e-18 1 scf/ciona01/G126/seq_dir/hrs/G126P612982F.T0/G126P6129... +3 228 6.2e-18 1 scf/ciona01/G126/seq_dir/hrs/G126P613854F.T0/G126P6138... -2 150 1.1e-16 2 scf/ciona01/G126/seq_dir/hrs/G126P613699F.T0/G126P6136... +1 210 5.2e-16 1 scf/ciona01/G126/seq_dir/hrs/G126P613506F.T0/G126P6135... -3 186 2.1e-13 1 scf/ciona01/G126/seq_dir/hrs/G126P613793F.T0/G126P6137... +2 179 1.2e-12 1 scf/ciona01/G126/seq_dir/hrs/G126P613298F.T0/G126P6132... -1 131 1.0e-09 2 scf/ciona01/G126/seq_dir/hrs/G126P613516R.T0/G126P6135... -1 161 1.6e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P612975R.T0/G126P6129... -2 158 2.6e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P613366F.T0/G126P6133... +2 159 3.0e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P613865F.T0/G126P6138... -1 156 1.2e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P612975F.T0/G126P6129... +1 140 7.2e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P613327R.T0/G126P6133... -1 137 2.0e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P613560F.T0/G126P6135... -3 100 6.2e-06 2 scf/ciona01/G126/seq_dir/hrs/G126P613657F.T0/G126P6136... +2 94 1.2e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P613482F.T0/G126P6134... -1 130 1.3e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P613656F.T0/G126P6136... -2 98 4.4e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P613177F.T0/G126P6131... +1 119 0.00025 1 scf/ciona01/G126/seq_dir/hrs/G126P613325R.T0/G126P6133... +3 116 0.00058 1 scf/ciona01/G126/seq_dir/hrs/G126P613399F.T0/G126P6133... -3 115 0.00073 1 scf/ciona01/G126/seq_dir/hrs/G126P613020R.T0/G126P6130... +1 112 0.0017 1 scf/ciona01/G126/seq_dir/hrs/G126P613403F.T0/G126P6134... -1 112 0.0017 1 scf/ciona01/G126/seq_dir/hrs/G126P613396F.T0/G126P6133... +2 109 0.0037 1 scf/ciona01/G126/seq_dir/hrs/G126P613180F.T0/G126P6131... +3 107 0.0059 1 scf/ciona01/G126/seq_dir/hrs/G126P613396R.T0/G126P6133... -3 102 0.023 1 scf/ciona01/G126/seq_dir/hrs/G126P613707F.T0/G126P6137... +2 100 0.040 1 scf/ciona01/G126/seq_dir/hrs/G126P613370R.T0/G126P6133... +2 96 0.11 1 scf/ciona01/G126/seq_dir/hrs/G126P613546R.T0/G126P6135... -2 96 0.11 1 scf/ciona01/G126/seq_dir/hrs/G126P613114F.T0/G126P6131... -3 75 0.13 2 scf/ciona01/G126/seq_dir/hrs/G126P613765R.T0/G126P6137... +1 72 0.38 2 scf/ciona01/G126/seq_dir/hrs/G126P613459F.T0/G126P6134... -1 88 0.55 1 scf/ciona01/G126/seq_dir/hrs/G126P612954F.T0/G126P6129... +1 87 0.66 1 scf/ciona01/G126/seq_dir/hrs/G126P614346F.T0/G126P6143... +1 87 0.69 1 scf/ciona01/G126/seq_dir/hrs/G126P613517R.T0/G126P6135... +2 84 0.92 1 scf/ciona01/G126/seq_dir/hrs/G126P613368F.T0/G126P6133... +1 84 0.92 1 scf/ciona01/G126/seq_dir/hrs/G126P612999F.T0/G126P6129... -3 84 0.92 1 scf/ciona01/G126/seq_dir/hrs/G126P613181F.T0/G126P6131... -1 80 0.9992 1 scf/ciona01/G126/seq_dir/hrs/G126P610180F.T0/G126P6101... -1 75 0.9998 2 >scf/ciona01/G126/seq_dir/hrs/G126P612190R.T0/G126P612190RD9.T0.seq 685 0 685 ABI Length = 685 Minus Strand HSPs: Score = 280 (98.6 bits), Expect = 1.4e-23, P = 1.4e-23 Identities = 53/138 (38%), Positives = 85/138 (61%), Frame = -3 Query: 387 EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFL 446 E R VP+++PH ++A+T+++GY IPKDT+V N W ++HD W NP F+P R L Sbjct: 494 EINRMRPNVPLSVPHYSSADTTLMGYRIPKDTIVLTNIWGIHHDEKIWKNPYEFNPERHL 315 Query: 447 DKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFS 506 D +G K +++VM F++G R C+G++L+ M+LFL L H+ FR P E M Sbjct: 314 DANGNFVK--SNKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRLSFRLKPGEKVDMAGE 141 Query: 507 YGLTIKPKSFKVNVTLRE 524 ++++P S+ V + R+ Sbjct: 140 SVISLRPFSYNVILEKRD 87 >scf/ciona01/G126/seq_dir/hrs/G126P613785R.T0/G126P613785RF11.T0.seq 718 0 718 ABI Length = 718 Minus Strand HSPs: Score = 260 (91.5 bits), Expect = 2.0e-21, P = 2.0e-21 Identities = 50/117 (42%), Positives = 74/117 (63%), Frame = -3 Query: 384 FLY-EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDP 442 FL+ E R VP+++PHA+ +TS++GY +PKDT+V N W ++HD W NP F+P Sbjct: 362 FLFKEIARLRPSVPLSLPHASNRDTSIMGYKVPKDTIVLTNIWGIHHDEKIWKNPYEFNP 183 Query: 443 ARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR-ANPNEP 500 R LD +G K + +VM F++G R C+G++L+ M+LFL L H+ F NP P Sbjct: 182 ERHLDANGNFVK--SKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFSFSLVNPRIP 12 >scf/ciona01/G126/seq_dir/hrs/G126P613174F.T0/G126P613174FE5.T0.seq 713 0 713 ABI Length = 713 Minus Strand HSPs: Score = 236 (83.1 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21 Identities = 55/129 (42%), Positives = 73/129 (56%), Frame = -3 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTI-PHATTANTSVLGYHIPKDTVVFVNQWSVNHDPV 432 D+ +PY A + E RF S +P I TT+ + GY IP V N WSV+HD V Sbjct: 387 DECRMPYTRAVMQEVFRFRSALPFNIIARKTTSELKLNGYKIPAGMPVIANLWSVHHDSV 208 Query: 433 KW-PNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQC 491 W P+PE F P R LD DG N ++ V+ FSVG R CIG L+K +LF+FI+ + + Sbjct: 207 TWAPDPEIFRPERHLDDDG--NFVPSNHVIPFSVGARSCIGRNLAKNELFVFITSILRRL 34 Query: 492 DF--RANPNEP 500 +F RA P Sbjct: 33 EFHHRARFRSP 1 Score = 42 (14.8 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21 Identities = 8/18 (44%), Positives = 14/18 (77%), Frame = -2 Query: 344 LLFTRYPDVQTRVQAELD 361 LL + P+V+ +++AELD Sbjct: 712 LLVLKNPEVKKKLKAELD 659 >scf/ciona01/G126/seq_dir/hrs/G126P612075F.T0/G126P612075FC10.T0.seq 733 0 733 ABI Length = 733 Plus Strand HSPs: Score = 232 (81.7 bits), Expect = 2.2e-18, P = 2.2e-18 Identities = 43/138 (31%), Positives = 75/138 (54%), Frame = +1 Query: 386 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARF 445 + + R +P+++PH NTS++GY IPK ++ N W + ++P WP PE F P R Sbjct: 28 WNSFRLRPPLPLSVPHVAHCNTSLMGYRIPKGAIILTNTWGIQNNPKLWPEPEKFKPERH 207 Query: 446 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNF 505 +D+ G K + V+ F++G R C+G++L+KM+LF+ ++ L + F + + Sbjct: 208 IDEFGKFIK--SPDVIPFNIGTRHCLGQQLAKMELFITLTSLCQRFRFTLPLGKTPDLTG 381 Query: 506 SYGLTIKPKSFKVNVTLR 523 ++P F V T R Sbjct: 382 ESTFILRPFPFHVIATKR 435 >scf/ciona01/G126/seq_dir/hrs/G126P612982F.T0/G126P612982FC5.T0.seq 696 0 696 ABI Length = 696 Plus Strand HSPs: Score = 228 (80.3 bits), Expect = 6.2e-18, P = 6.2e-18 Identities = 44/91 (48%), Positives = 65/91 (71%), Frame = +3 Query: 386 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARF 445 ++ +RF+S + TIPH+TT +T++ GY I ++T+V ++Q+SVNHDP W NPE FDP RF Sbjct: 198 FQVLRFASPLSSTIPHSTTKDTTLKGYKIKRNTMVIISQYSVNHDPKIWRNPEVFDPERF 377 Query: 446 LDKD---GLINKD-LTSRVMIFSVGKRRCIG 472 L +D L+ D L +V+ FSVG+R+C G Sbjct: 378 LTRDENTNLVFNDALAEKVLSFSVGERKCPG 470 >scf/ciona01/G126/seq_dir/hrs/G126P613854F.T0/G126P613854FH12.T0.seq 710 0 710 ABI Length = 710 Minus Strand HSPs: Score = 150 (52.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16 Identities = 28/79 (35%), Positives = 48/79 (60%), Frame = -2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W+V+++P W P F P R LD G N + V+ FSVG R C+GE++++M+ Sbjct: 301 ISTNIWAVHNNPDVWDEPNKFKPERHLDDKG--NFVQSKHVIPFSVGPRHCLGEQVARME 128 Query: 480 LFLFISILAHQCDFRANPN 498 +F+F+ L + +F +P+ Sbjct: 127 VFIFLVSLVQKFEFLPDPD 71 Score = 119 (41.9 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16 Identities = 21/51 (41%), Positives = 30/51 (58%), Frame = -1 Query: 370 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 P M + ++PY AF+ E RF + VP+ +PH T + + GY IPK T V Sbjct: 524 PSMSQKVDMPYTCAFIQEVYRFRTLVPLNVPHKTNKSFDINGYTIPKGTTV 372 >scf/ciona01/G126/seq_dir/hrs/G126P613699F.T0/G126P613699FH11.T0.seq 737 0 737 ABI Length = 737 Plus Strand HSPs: Score = 210 (73.9 bits), Expect = 5.2e-16, P = 5.2e-16 Identities = 57/191 (29%), Positives = 90/191 (47%), Frame = +1 Query: 289 PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTR 348 P+DM L +A + G L L ++ + DT + A+ W + L R Sbjct: 148 PQDMKRMAFLDVLLRAESED---GRSLSLSDIQEEVDTFMFEGHDTTAAAMTWTIYLIGR 318 Query: 349 YPDVQTRVQAELDQVVGRDRLPCMGDQ-PNLPYVLAFLYEAMRFSSFVPVTIPHATTANT 407 +P +Q R+ ELD V G D L + + E++R VP I TT Sbjct: 319 HPAIQARIHEELDDVFGGDMGTITNSHLQKLSLLERTIKESLRMFPSVPF-IGRVTTEEC 495 Query: 408 SVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 467 SV + IP T V + S++H+P WP+ + FDP RFL ++ + + S + FS G Sbjct: 496 SVGSHTIPAGTQVAIFIDSLHHNPSVWPDVDRFDPDRFLPEN-CVGRHPYSFIP-FSAGP 669 Query: 468 RRCIGEELSKMQ 479 R CIG++++ M+ Sbjct: 670 RNCIGQKVALME 705 >scf/ciona01/G126/seq_dir/hrs/G126P613506F.T0/G126P613506FG8.T0.seq 732 0 732 ABI Length = 732 Minus Strand HSPs: Score = 186 (65.5 bits), Expect = 2.1e-13, P = 2.1e-13 Identities = 37/99 (37%), Positives = 58/99 (58%), Frame = -3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 V+ N W ++DPV WPNP FDP R +DK G N ++ V+ FSVG R CIGE+L+K + Sbjct: 682 VYSNIWGAHNDPVVWPNPSKFDPYRHIDKAG--NFISSNNVIPFSVGNRNCIGEQLAKQE 509 Query: 480 LFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKSFKV 518 +F+F++ + + + P + + F G S+K+ Sbjct: 508 IFIFVTKILQKFELTVPPRQTLAV-FGRGELFAIYSYKL 395 >scf/ciona01/G126/seq_dir/hrs/G126P613793F.T0/G126P613793FG1.T0.seq 734 0 734 ABI Length = 734 Plus Strand HSPs: Score = 179 (63.0 bits), Expect = 1.2e-12, P = 1.2e-12 Identities = 38/97 (39%), Positives = 55/97 (56%), Frame = +2 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W+V++DPV W P F P R LD DG N V+ FSVG R C+GE+L++M++F+ Sbjct: 137 NLWAVHNDPVVWDEPNKFKPERHLDADG--NFVQLKHVIPFSVGPRHCLGEQLARMEVFI 310 Query: 483 FISILAHQCDFRANPNEPAKMNFSYGLTIK---PKSFKV 518 F+ L + +F +P N G + P SFK+ Sbjct: 311 FLVSLVQKFEFLPDPKATVLYNLENGTSGAVHVPLSFKI 427 >scf/ciona01/G126/seq_dir/hrs/G126P613298F.T0/G126P613298FF4.T0.seq 721 0 721 ABI Length = 721 Minus Strand HSPs: Score = 131 (46.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09 Identities = 23/56 (41%), Positives = 37/56 (66%), Frame = -1 Query: 79 RRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSGGRSMAF 134 RRYG ++ I+LG+ +++LN I +AL++Q F+ RP F SF+ +S GR + F Sbjct: 277 RRYGPIYLIKLGTADVLILNNYDVIKEALIRQRGVFSGRPVFESFKKISQGRGIVF 110 Score = 77 (27.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09 Identities = 11/29 (37%), Positives = 18/29 (62%), Frame = -2 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARR 80 PGP+ WP+IGN +G +S +A++ Sbjct: 414 PGPYPWPVIGNVVEMGSQPQISLTNMAKK 328 >scf/ciona01/G126/seq_dir/hrs/G126P613516R.T0/G126P613516RE12.T0.seq 702 0 702 ABI Length = 702 Minus Strand HSPs: Score = 161 (56.7 bits), Expect = 1.6e-09, P = 1.6e-09 Identities = 34/105 (32%), Positives = 60/105 (57%), Frame = -1 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L++++ Sbjct: 615 IISNLWWVHNDPEYWDEPDVFRPERHLDTNG--NLVMLNRVVPFSIGPRNCLGENLARIE 442 Query: 480 LFLFISILAHQCDFRANPNEP-AKMNFSYGLTIKPKSFKVNVTLRE 524 ++LF+ + + NP++P + + G P + N+ L+E Sbjct: 441 IYLFLVSILQKFVVLPNPDDPNPPITCNPGAINAPSRY--NIVLKE 310 >scf/ciona01/G126/seq_dir/hrs/G126P612975R.T0/G126P612975RB6.T0.seq 680 0 680 ABI Length = 680 Minus Strand HSPs: Score = 158 (55.6 bits), Expect = 2.6e-09, P = 2.6e-09 Identities = 29/67 (43%), Positives = 41/67 (61%), Frame = -2 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVK 433 D+ LP+V+A + E R SFVP +PHA +T++ GY IP TV+ ++ SVNHD Sbjct: 346 DRSQLPFVMALITEVSRHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVNHDHTL 167 Query: 434 WPNPENF 440 W +P F Sbjct: 166 WDSPGEF 146 >scf/ciona01/G126/seq_dir/hrs/G126P613366F.T0/G126P613366FH12.T0.seq 702 0 702 ABI Length = 702 Plus Strand HSPs: Score = 159 (56.0 bits), Expect = 3.0e-09, P = 3.0e-09 Identities = 35/91 (38%), Positives = 53/91 (58%), Frame = +2 Query: 429 HDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILA 488 H+P W P F P R LD G N ++ V+ FSVG R C+GE+L++M++F+++ L Sbjct: 41 HNPDVWDEPNKFKPERHLDDKG--NFVQSNHVIPFSVGPRHCLGEKLARMEVFIYLVSLV 214 Query: 489 HQCDFRANPNE---PAKMNFSYGLTIKPKSFKV 518 + +F +P+ P N SYG PK FK+ Sbjct: 215 QKFEFLPDPDATDLPDIENGSYGPLCAPKPFKM 313 >scf/ciona01/G126/seq_dir/hrs/G126P613865F.T0/G126P613865FB6.T0.seq 738 0 738 ABI Length = 738 Minus Strand HSPs: Score = 156 (54.9 bits), Expect = 1.2e-08, P = 1.2e-08 Identities = 34/98 (34%), Positives = 58/98 (59%), Frame = -1 Query: 427 VNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISI 486 V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L++++++LF+ Sbjct: 624 VHNDPEHWDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGPRNCLGENLARIEIYLFLVS 451 Query: 487 LAHQCDFRANPNEP-AKMNFSYGLTIKPKSFKVNVTLRE 524 + + NP++P M + G P S+ N+ L+E Sbjct: 450 ILQKFVVLPNPDDPNPPMTCNPGAINAPGSY--NIVLKE 340 >scf/ciona01/G126/seq_dir/hrs/G126P612975F.T0/G126P612975FB6.T0.seq 675 0 675 ABI Length = 675 Plus Strand HSPs: Score = 140 (49.3 bits), Expect = 7.2e-07, P = 7.2e-07 Identities = 26/69 (37%), Positives = 43/69 (62%), Frame = +1 Query: 39 LLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLN 98 L+ RR+ + PPGPFAWP++GN ++ + + + R YGDV+ + GS +VV+N Sbjct: 280 LIYLHRRKRDNLPPGPFAWPVLGNLLSLRSNSTAALKEIRRTYGDVYSLYFGSSLVVVVN 459 Query: 99 GERAIHQAL 107 G +A+ + L Sbjct: 460 G-KAVEECL 483 >scf/ciona01/G126/seq_dir/hrs/G126P613327R.T0/G126P613327RG4.T0.seq 702 0 702 ABI Length = 702 Minus Strand HSPs: Score = 137 (48.2 bits), Expect = 2.0e-06, P = 2.0e-06 Identities = 30/71 (42%), Positives = 46/71 (64%), Frame = -1 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W V++DP P+ F P R LD +G N + +RV+ FS+G R C+GE L++++++L Sbjct: 213 NLWWVHNDPEYCDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGTRNCLGENLARIEIYL 40 Query: 483 F-ISI-LAHQCDF 493 F +SI HQ F Sbjct: 39 FLVSIEFHHQWSF 1 >scf/ciona01/G126/seq_dir/hrs/G126P613560F.T0/G126P613560FG5.T0.seq 710 0 710 ABI Length = 710 Minus Strand HSPs: Score = 100 (35.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06 Identities = 19/42 (45%), Positives = 28/42 (66%), Frame = -3 Query: 105 QALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRR 146 QALV+QGS+F+ RP+ + ++ G +AF Y E WK QR+ Sbjct: 345 QALVKQGSSFSGRPSVSILDEITNGHGLAFLDYCEKWKSQRK 220 Score = 76 (26.8 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06 Identities = 18/59 (30%), Positives = 29/59 (49%), Frame = -2 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQ 110 PG P +G V + + +F + + YG V +R+G VVLN +I+Q +Q Sbjct: 646 PGRXGIPFLGVVPFVEKQSERTFFKWKKDYGSVLSVRMGREDWVVLNDYESIYQVCFKQ 470 >scf/ciona01/G126/seq_dir/hrs/G126P613657F.T0/G126P613657FB5.T0.seq 707 0 707 ABI Length = 707 Plus Strand HSPs: Score = 94 (33.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05 Identities = 22/59 (37%), Positives = 31/59 (52%), Frame = +2 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQ 109 PPGP PL+G VG+ F + + YG V +R+G VVLN +I+Q V+ Sbjct: 44 PPGPRGIPLLGVVPFVGKVPEQVFFKSKKDYGSVMTVRMGREDWVVLNDYESIYQVGVK 220 Score = 80 (28.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05 Identities = 16/42 (38%), Positives = 23/42 (54%), Frame = +2 Query: 105 QALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRR 146 Q LV+QGS F+ RP+ ++ G + Y E WK QR+ Sbjct: 323 QTLVKQGSIFSGRPSIPILEEMTKGHGILLLDYGEKWKSQRK 448 >scf/ciona01/G126/seq_dir/hrs/G126P613482F.T0/G126P613482FB9.T0.seq 696 0 696 ABI Length = 696 Minus Strand HSPs: Score = 130 (45.8 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 26/64 (40%), Positives = 44/64 (68%), Frame = -1 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELSKM 478 + N ++V++DPV W P FD R +DKDG K + S+ +I F VG R C+G++L+++ Sbjct: 249 ILPNIYAVHNDPVIWTEPSKFDIYRHIDKDG---KFIHSKKVIPFGVGARVCLGKKLAQL 79 Query: 479 QLFLF 483 ++F+F Sbjct: 78 EVFIF 64 >scf/ciona01/G126/seq_dir/hrs/G126P613656F.T0/G126P613656FD10.T0.seq 768 0 768 ABI Length = 768 Minus Strand HSPs: Score = 98 (34.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05 Identities = 19/59 (32%), Positives = 33/59 (55%), Frame = -2 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVF 421 +VG D +P + +P+ AF+ E++R+ + VP+ H + + GY IPK T V+ Sbjct: 527 IVGADGIPSSKLREKMPFTCAFIQESVRYFTVVPMGSQHYCQEDIKINGYTIPKGTTVW 351 Score = 71 (25.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05 Identities = 12/46 (26%), Positives = 26/46 (56%), Frame = -2 Query: 322 ATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD 367 ++I D+F +T S +L W +L +P + + E+D+ +G++ Sbjct: 710 SSIRDMFVGGSETTSNSLLWCFVLLMHHPKHKETIVKEIDEAMGKN 573 >scf/ciona01/G126/seq_dir/hrs/G126P613177F.T0/G126P613177FB6.T0.seq 700 0 700 ABI Length = 700 Plus Strand HSPs: Score = 119 (41.9 bits), Expect = 0.00025, P = 0.00025 Identities = 21/51 (41%), Positives = 30/51 (58%), Frame = +1 Query: 370 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 P M + ++PY AF+ E RF + VP+ +PH T + + GY IPK T V Sbjct: 493 PSMSQKVDMPYTCAFIQEVYRFRTLVPLNVPHKTNKSFDINGYTIPKGTTV 645 >scf/ciona01/G126/seq_dir/hrs/G126P613325R.T0/G126P613325RF1.T0.seq 714 0 714 ABI Length = 714 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 0.00058, P = 0.00058 Identities = 23/55 (41%), Positives = 35/55 (63%), Frame = +3 Query: 368 RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFV 422 +LP + + NLP + AF+ E R + +P+ + H T A+ + GYHIPK+TVV V Sbjct: 60 KLPSVDHKENLPKLQAFIQEIYRNLTLLPLGLQHKTMADVELCGYHIPKNTVVRV 224 >scf/ciona01/G126/seq_dir/hrs/G126P613399F.T0/G126P613399FA1.T0.seq 697 0 697 ABI Length = 697 Minus Strand HSPs: Score = 115 (40.5 bits), Expect = 0.00073, P = 0.00073 Identities = 30/90 (33%), Positives = 51/90 (56%), Frame = -3 Query: 437 PENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELSKMQLFLFISILAHQCDFR- 494 P N D R +DK+G K + S+ +I F +G R CIGE+L++ +++LF++ + + + Sbjct: 476 PTNXDIYRHIDKNG---KFVASKKVIPFGIGARSCIGEKLAQTEIYLFLANIIKRFEILP 306 Query: 495 -ANPNEPAKMNFSY-GLTIKPKSFKVNVTLRES 525 + P +N G P SFKV + +R S Sbjct: 305 DSGSKHPPPLNDGVTGFAFTPFSFKVVLKIRNS 207 >scf/ciona01/G126/seq_dir/hrs/G126P613020R.T0/G126P613020RF7.T0.seq 709 0 709 ABI Length = 709 Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.0017, P = 0.0017 Identities = 21/63 (33%), Positives = 37/63 (58%), Frame = +1 Query: 189 AFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQ 248 A +P + + NV+S +CFG +S +DPE ++ +S N F R +G+ +V+ P+L+ Sbjct: 472 AITNPDEIVHHSATNVISNICFGRSFSKNDPELQKFVSINRAFDRAMGSAQIVNFWPFLK 651 Query: 249 YFP 251 P Sbjct: 652 SVP 660 >scf/ciona01/G126/seq_dir/hrs/G126P613403F.T0/G126P613403FE5.T0.seq 712 0 712 ABI Length = 712 Minus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.0017, P = 0.0017 Identities = 24/77 (31%), Positives = 43/77 (55%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD-RLPCMGDQPNLPYVL 382 + D+FGA+ DT++ AL W+++ ++ Y QTR Q E+D+ V + LP + + + Sbjct: 610 VGDLFGANVDTMTVALAWMIVYWSTYHQAQTRAQEEIDRFVETNFHLPRYFLL--IVFFI 437 Query: 383 AFLYEAMRFSSFVPVTIP 400 + + F SF T+P Sbjct: 436 YIFFRVIMFKSFAHTTVP 383 >scf/ciona01/G126/seq_dir/hrs/G126P613396F.T0/G126P613396FF8.T0.seq 712 0 712 ABI Length = 712 Plus Strand HSPs: Score = 109 (38.4 bits), Expect = 0.0037, P = 0.0037 Identities = 21/59 (35%), Positives = 33/59 (55%), Frame = +2 Query: 39 LLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVL 97 L+ RR+ PPGPFAWP++GN ++ + + + R Y DV+ + GS + VL Sbjct: 377 LIYLHRRKRDHLPPGPFAWPVLGNLLSLRSNSTAALKEIRRTYRDVYSLYFGSRLVAVL 553 >scf/ciona01/G126/seq_dir/hrs/G126P613180F.T0/G126P613180FC7.T0.seq 694 0 694 ABI Length = 694 Plus Strand HSPs: Score = 107 (37.7 bits), Expect = 0.0059, P = 0.0059 Identities = 19/49 (38%), Positives = 32/49 (65%), Frame = +3 Query: 203 NVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFP 251 NV+S +CFG +S +DPE ++ +S N F R +G+ +V+ P+L+ P Sbjct: 51 NVISNICFGRSFSKNDPELQKFVSINRAFDRAMGSAQIVNFWPFLKSVP 197 >scf/ciona01/G126/seq_dir/hrs/G126P613396R.T0/G126P613396RF8.T0.seq 710 0 710 ABI Length = 710 Minus Strand HSPs: Score = 102 (35.9 bits), Expect = 0.023, P = 0.023 Identities = 17/41 (41%), Positives = 29/41 (70%), Frame = -3 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVV 364 + D+FGA+ DT++ AL W+++ ++ Y QTR Q E+D+ V Sbjct: 246 VGDLFGANVDTMTVALAWMIVYWSTYHQAQTRAQEEIDRFV 124 >scf/ciona01/G126/seq_dir/hrs/G126P613707F.T0/G126P613707FF4.T0.seq 736 0 736 ABI Length = 736 Plus Strand HSPs: Score = 100 (35.2 bits), Expect = 0.041, P = 0.040 Identities = 28/114 (24%), Positives = 55/114 (48%), Frame = +2 Query: 8 NDPWPLNPLSIQQTTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVG 67 N P++ +S ++ LL VL + + R+ R+ PPG PL+G +G Sbjct: 152 NQQ*PVSFISEY*KLIMFLLFVLGCFILALLFWKPIRKP-RNYPPGFDGVPLLGCLPFLG 328 Query: 68 QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFA 121 + ++ YGDVF ++ + +V++N +AI + +++QG + F+ Sbjct: 329 PQPAKTIMEWSKTYGDVFYVKYATQNVVMINSLQAIKETMIKQGHISSGMTCFS 490 >scf/ciona01/G126/seq_dir/hrs/G126P613370R.T0/G126P613370RA1.T0.seq 717 0 717 ABI Length = 717 Plus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.11, P = 0.11 Identities = 20/59 (33%), Positives = 35/59 (59%), Frame = +2 Query: 76 RLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSGGRSMAF 134 ++ +YG + ++L VVLN +I++ALV+QG F+ RP F+ +GGR ++ Sbjct: 254 KIGWKYGPIVGVKLLRKFTVVLNSVESINEALVKQGHIFSGRPDSIMFQAFTGGRGTSY 430 >scf/ciona01/G126/seq_dir/hrs/G126P613546R.T0/G126P613546RE8.T0.seq 758 0 758 ABI Length = 758 Minus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.12, P = 0.11 Identities = 23/78 (29%), Positives = 43/78 (55%), Frame = -2 Query: 457 TSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR-ANPNEPAKMNFSYGLTIKPKS 515 ++ V+ FSVG R CIG L+K +LF+FI+ + + D A+ ++ G+ + P Sbjct: 748 SNHVIPFSVGARSCIGRNLAKNELFVFITSVLRRFDLELADGCHVGDISGDSGMLLHPPK 569 Query: 516 FKVNVTLRESMELLDSAV 533 +KV +++ + D A+ Sbjct: 568 YKVKGSVKM*KSITDFAL 515 >scf/ciona01/G126/seq_dir/hrs/G126P613114F.T0/G126P613114FG7.T0.seq 698 0 698 ABI Length = 698 Minus Strand HSPs: Score = 75 (26.4 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 13/43 (30%), Positives = 26/43 (60%), Frame = -3 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 + D+F A +T +T L+W LL +P Q +++ E+ + +G+ Sbjct: 288 VRDLFFAGSETTATTLRWALLSLIHHPKKQEKLRKEIFKFLGK 160 Score = 61 (21.5 bits), Expect = 0.14, Sum P(2) = 0.13 Identities = 9/29 (31%), Positives = 19/29 (65%), Frame = -2 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRF 391 V G++++P + ++ +PY AF+ E +F Sbjct: 94 VTGQEKIPAVDNKSYMPYTCAFMQEVWKF 8 >scf/ciona01/G126/seq_dir/hrs/G126P613765R.T0/G126P613765RB2.T0.seq 699 0 699 ABI Length = 699 Plus Strand HSPs: Score = 72 (25.3 bits), Expect = 0.47, Sum P(2) = 0.38 Identities = 11/44 (25%), Positives = 24/44 (54%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD 367 + ++ A +T T L WL++ YP+ ++ E+ ++G+D Sbjct: 187 VRELLLAGNETTGTQLSWLIVAAMNYPEWHDKIHKEIIDLIGKD 318 Score = 59 (20.8 bits), Expect = 0.47, Sum P(2) = 0.38 Identities = 12/37 (32%), Positives = 18/37 (48%), Frame = +3 Query: 378 LPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHI 414 LP AF+ E +R + PH+ + +V GY I Sbjct: 588 LPLTCAFIQETLRLRPIGSLNAPHSASETVTVNGYTI 698 >scf/ciona01/G126/seq_dir/hrs/G126P613459F.T0/G126P613459FF12.T0.seq 652 0 652 ABI Length = 652 Minus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.80, P = 0.55 Identities = 27/80 (33%), Positives = 39/80 (48%), Frame = -1 Query: 440 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE 499 F P LD D + LT +V+ FSVG R C E L++M++F+F + +F +P Sbjct: 340 FTPTGLLDPDETFVQ-LT-QVIPFSVGPRHCWEEHLARMEVFIFWFSWVQKFEFLPDPKA 167 Query: 500 PA---KMNFSYGLTIKPKSFKV 518 N S G P FK+ Sbjct: 166 KVLSDNENGSSGAAFVPLPFKI 101 >scf/ciona01/G126/seq_dir/hrs/G126P612954F.T0/G126P612954FH3.T0.seq 673 0 673 ABI Length = 673 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.1, P = 0.66 Identities = 15/48 (31%), Positives = 28/48 (58%), Frame = +1 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNG 99 P P P+IGN + + H+ + A+ +GD+F+I++G +V+ G Sbjct: 271 PSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKMGCFDTLVVTG 414 >scf/ciona01/G126/seq_dir/hrs/G126P614346F.T0/G126P614346FF5.T0.seq 720 0 720 ABI Length = 720 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.2, P = 0.69 Identities = 19/56 (33%), Positives = 31/56 (55%), Frame = +1 Query: 378 LPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWS-VNHDPV 432 LP AF+ E +R + PH+ + +V GY IP T+V V++ S +H+P+ Sbjct: 205 LPLTCAFIQETLRLRPIGSLNAPHSASETVTVNGYTIPAGTMVSVSKSS*FSHNPL 372 >scf/ciona01/G126/seq_dir/hrs/G126P613517R.T0/G126P613517RG11.T0.seq 706 0 706 ABI Length = 706 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.5, P = 0.92 Identities = 17/56 (30%), Positives = 29/56 (51%), Frame = +2 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 G +P LP + AF+ E R+ + VP+++ H + + + G+ I KDT V Sbjct: 197 GEHVIPSADHGEKLPLLRAFIQELYRYRTIVPMSLQHRASEDVEIGGHLITKDTTV 364 >scf/ciona01/G126/seq_dir/hrs/G126P613368F.T0/G126P613368FA10.T0.seq 707 0 707 ABI Length = 707 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.5, P = 0.92 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 319 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 453 >scf/ciona01/G126/seq_dir/hrs/G126P612999F.T0/G126P612999FA9.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.5, P = 0.92 Identities = 17/50 (34%), Positives = 27/50 (54%), Frame = -3 Query: 106 ALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNF 155 ALV QG++F+ RP A+ ++ G + Y + WK QR S +R + Sbjct: 684 ALVNQGNSFSGRPLIATLDQITEGHGIVLLDYGDWWKRQRSFGFSTLRGW 535 >scf/ciona01/G126/seq_dir/hrs/G126P613181F.T0/G126P613181FB6.T0.seq 738 0 738 ABI Length = 738 Minus Strand HSPs: Score = 80 (28.2 bits), Expect = 7.2, P = 1.00 Identities = 19/54 (35%), Positives = 29/54 (53%), Frame = -1 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAI 103 PPG P++G +G+ H + A+ +R +YG V +R G VVLN +I Sbjct: 261 PPGVRGIPVLGALPYLGRFPHETIAKWSRDKYGPVMSVRFGQEDAVVLNDYESI 100 >scf/ciona01/G126/seq_dir/hrs/G126P610180F.T0/G126P610180FF6.T0.seq 698 0 698 ABI Length = 698 Minus Strand HSPs: Score = 75 (26.4 bits), Expect = 8.7, Sum P(2) = 1.00 Identities = 12/46 (26%), Positives = 25/46 (54%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 369 + ++ A +T T L WL++ YP+ ++ E+ ++G+D L Sbjct: 566 VRELLLAGNETTGTQLSWLIVAAMNYPEWHDKIHKEIIDLIGKDSL 429 Score = 43 (15.1 bits), Expect = 8.7, Sum P(2) = 1.00 Identities = 8/27 (29%), Positives = 13/27 (48%), Frame = -3 Query: 378 LPYVLAFLYEAMRFSSFVPVTIPHATT 404 LP AF+ E +R + PH+ + Sbjct: 144 LPLTCAFIQETLRLRPIGSLNAPHSAS 64 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.137 0.417 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 543 543 10. 74 3 13 22 0.064 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_31.seq Title: /seqs/databases/ciona/ciona_31.seq Release date: unknown Posted date: 3:11 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 74,399,752 # of sequences in database: 100,000 # of database sequences satisfying E: 41 No. of states in DFA: 545 (58 KB) Total size of DFA: 104 KB (128 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 12.37u 0.09s 12.46t Elapsed: 00:00:18 Total cpu time: 12.39u 0.12s 12.51t Elapsed: 00:00:18 Start: Mon Apr 1 21:59:52 2002 End: Mon Apr 1 22:00:10 2002