TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 3_CYP1B1_NM_000104 (543 letters) Database: /seqs/databases/ciona/ciona_26.seq 100,000 sequences; 76,962,206 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P602459F.T0/G126P6024... +3 178 2.5e-28 3 scf/ciona01/G126/seq_dir/hrs/G126P611658F.T0/G126P6116... -2 235 1.1e-18 1 scf/ciona01/G126/seq_dir/hrs/G126P611862R.T0/G126P6118... -1 154 1.9e-15 2 scf/ciona01/G126/seq_dir/hrs/G126P610430R.T0/G126P6104... -1 182 5.9e-13 1 scf/ciona01/G126/seq_dir/hrs/G126P611829F.T0/G126P6118... +2 164 2.2e-10 1 scf/ciona01/G126/seq_dir/hrs/G126P606661F.T0/G126P6066... +2 109 2.3e-09 2 scf/ciona01/G126/seq_dir/hrs/G126P611793R.T0/G126P6117... -3 146 1.5e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P611105R.T0/G126P6111... +1 146 2.0e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P610498F.T0/G126P6104... -3 100 3.5e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P611801R.T0/G126P6118... -2 139 1.3e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P610840R.T0/G126P6108... +3 135 4.3e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P610441F.T0/G126P6104... -2 131 1.2e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P611146F.T0/G126P6111... -1 96 3.5e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P611838R.T0/G126P6118... -1 102 3.5e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P611689F.T0/G126P6116... +2 124 7.0e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P6108... -3 121 0.00017 1 scf/ciona01/G126/seq_dir/hrs/G126P610683R.T0/G126P6106... +2 116 0.00062 1 scf/ciona01/G126/seq_dir/hrs/G126P610353R.T0/G126P6103... +1 110 0.0031 1 scf/ciona01/G126/seq_dir/hrs/G126P610418R.T0/G126P6104... +2 108 0.0048 1 scf/ciona01/G126/seq_dir/hrs/G126P610329R.T0/G126P6103... +2 107 0.0073 1 scf/ciona01/G126/seq_dir/hrs/G126P610637R.T0/G126P6106... +1 102 0.023 1 scf/ciona01/G126/seq_dir/hrs/G126P611804R.T0/G126P6118... +1 100 0.042 1 scf/ciona01/G126/seq_dir/hrs/G126P610549F.T0/G126P6105... -2 95 0.14 1 scf/ciona01/G126/seq_dir/hrs/G126P611796R.T0/G126P6117... -3 91 0.19 2 scf/ciona01/G126/seq_dir/hrs/G126P611811R.T0/G126P6118... -3 74 0.23 2 scf/ciona01/G126/seq_dir/hrs/G126P610473F.T0/G126P6104... +1 93 0.23 1 scf/ciona01/G126/seq_dir/hrs/G126P611187R.T0/G126P6111... -3 85 0.33 2 scf/ciona01/G126/seq_dir/hrs/G126P611892F.T0/G126P6118... -2 91 0.34 1 scf/ciona01/G126/seq_dir/hrs/G126P610698R.T0/G126P6106... +2 89 0.49 1 scf/ciona01/G126/seq_dir/hrs/G126P610360F.T0/G126P6103... -3 88 0.61 1 scf/ciona01/G126/seq_dir/hrs/G126P609907R.T0/G126P6099... -2 88 0.62 1 scf/ciona01/G126/seq_dir/hrs/G126P610795R.T0/G126P6107... +1 77 0.77 2 scf/ciona01/G126/seq_dir/hrs/G126P610638F.T0/G126P6106... +2 85 0.87 1 scf/ciona01/G126/seq_dir/hrs/G126P610351F.T0/G126P6103... +2 85 0.87 1 scf/ciona01/G126/seq_dir/hrs/G126P611558F.T0/G126P6115... +2 84 0.92 1 scf/ciona01/G126/seq_dir/hrs/G126P610369F.T0/G126P6103... +2 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P610578R.T0/G126P6105... +1 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P610442R.T0/G126P6104... +1 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P611335F.T0/G126P6113... +1 83 0.97 1 scf/ciona01/G126/seq_dir/hrs/G126P611676F.T0/G126P6116... +2 83 0.98 1 scf/ciona01/G126/seq_dir/hrs/G126P610373F.T0/G126P6103... +3 82 0.99 1 scf/ciona01/G126/seq_dir/hrs/G126P611213R.T0/G126P6112... -2 81 0.997 1 scf/ciona01/G126/seq_dir/hrs/G126P610534R.T0/G126P6105... +1 79 0.99992 1 >scf/ciona01/G126/seq_dir/hrs/G126P602459F.T0/G126P602459FC2.T0.seq 687 0 687 ABI Length = 687 Plus Strand HSPs: Score = 178 (62.7 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28 Identities = 30/72 (41%), Positives = 48/72 (66%), Frame = +3 Query: 380 YVLAFLY-EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPE 438 Y++ ++ E R VP ++PH ++A+T+++GY IPKDT+V N W+++HD W NP Sbjct: 327 YLIIHVFKETNRVRPNVPFSVPHHSSADTTLMGYRIPKDTIVLTNIWAIHHDETIWKNPY 506 Query: 439 NFDPARFLDKDG 450 F+P R LD +G Sbjct: 507 EFNPERHLDANG 542 Score = 108 (38.0 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28 Identities = 20/60 (33%), Positives = 35/60 (58%), Frame = +3 Query: 326 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFL 385 D+F A DT ++ + W++L +YP+VQ + Q E+D+V+G + M +PY A + Sbjct: 54 DLFIAGTDTTTSTICWIILYLCQYPEVQRKFQEEVDRVLGSSGVLKMAHAEKMPYARAVI 233 Score = 84 (29.6 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28 Identities = 15/36 (41%), Positives = 23/36 (63%), Frame = +1 Query: 464 SVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE 499 ++G R C+G++L+ M+LFL L H+ FR P E Sbjct: 577 NIGLRSCLGQQLANMELFLVTVSLFHRFSFRLKPGE 684 >scf/ciona01/G126/seq_dir/hrs/G126P611658F.T0/G126P611658FD9.T0.seq 706 0 706 ABI Length = 706 Minus Strand HSPs: Score = 235 (82.7 bits), Expect = 1.1e-18, P = 1.1e-18 Identities = 46/104 (44%), Positives = 69/104 (66%), Frame = -2 Query: 378 LPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKW-PN 436 L Y A + E +R P T+ H T +T++ G+ + KDTV+ N +SV+HDPV W P+ Sbjct: 354 LNYTRAVVQEVIRLRPIAPTTMFHKATEDTTIQGFFVAKDTVIMPNIYSVHHDPVTWAPD 175 Query: 437 PENFDPARFLDKDGL-INKDLTSRVMIFSVGKRRCIGEELSKMQLF 481 P++F P R LD DGL +N D V+ FSVG RRC+GE++++ ++F Sbjct: 174 PDDFRPERHLDDDGLFVNSD---HVIPFSVGWRRCVGEKIARTEIF 46 >scf/ciona01/G126/seq_dir/hrs/G126P611862R.T0/G126P611862RC7.T0.seq 692 0 692 ABI Length = 692 Minus Strand HSPs: Score = 154 (54.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15 Identities = 29/71 (40%), Positives = 45/71 (63%), Frame = -1 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W+V++DP W P F P R LD G N +S V+ FSVG R C+GE+L++M++F+ Sbjct: 305 NLWAVHNDPDVWDEPSKFKPERHLDDKG--NFVQSSHVIPFSVGPRHCLGEQLARMEIFI 132 Query: 483 FISILAHQCDF 493 ++ L + +F Sbjct: 131 YLVSLVQKFEF 99 Score = 100 (35.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15 Identities = 18/50 (36%), Positives = 28/50 (56%), Frame = -2 Query: 371 CMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 C ++ N+PY AF+ E R+ + VP+ + H T + + Y IPK T V Sbjct: 523 CSENKSNMPYTCAFMQEVYRYRTLVPLNLTHMTNEDVILNEYSIPKGTTV 374 >scf/ciona01/G126/seq_dir/hrs/G126P610430R.T0/G126P610430RB11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 182 (64.1 bits), Expect = 5.9e-13, P = 5.9e-13 Identities = 56/213 (26%), Positives = 104/213 (48%), Frame = -1 Query: 166 LEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFRELL 225 +E V+ E+R V L + G D + AN++ ++ FG RY ++DP F+ +L Sbjct: 680 IESLVVQESRYFVNQLAEHN--GKVYDMKTDVYNFTANIICSIVFGRRYDYNDPFFKMIL 507 Query: 226 SHNEE-FGRTVGAGSLVDVM--PWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCES 282 +E+ G A ++ ++ P L++ P P R + F + +L+ H + Sbjct: 506 ESSEKALGDPADAAIMLPMILFPGLRHIP-PFRGANQRFLNHQSEILSMLLEVIEEHQKK 330 Query: 283 LRPGAAPRDMMDAFILSAEKKAAGDSHGGGARL-DLENVPATITDIFGASQDTLSTALQW 341 P D +DA+I E+K G +L + + + + D+F A +T S +QW Sbjct: 329 FDPDNI-EDFIDAYIY--EQKFG---LGKNTKLFENDQLKYYVRDLFIAGIETTSNTIQW 168 Query: 342 LLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNL 378 +L F +P+ + + E+ +V+G D +PCM D+ + Sbjct: 167 SVLAFLYHPEYVSLMYNEIYEVLGSDGVPCMKDRDKM 57 >scf/ciona01/G126/seq_dir/hrs/G126P611829F.T0/G126P611829FG3.T0.seq 682 0 682 ABI Length = 682 Plus Strand HSPs: Score = 164 (57.7 bits), Expect = 2.2e-10, P = 2.2e-10 Identities = 31/81 (38%), Positives = 51/81 (62%), Frame = +2 Query: 417 DTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELS 476 D +FVN W+V+++P W P F P R LD G N ++ V+ FSVG R C+GE+L+ Sbjct: 443 DWQIFVNLWAVHNNPDVWDEPNKFKPERHLDDKG--NFVQSNHVIPFSVGPRHCLGEKLA 616 Query: 477 KMQLFLFISILAHQCDFRANP 497 +M++F+++ L + +F +P Sbjct: 617 RMEVFIYLVSLVQKFEFLPDP 679 >scf/ciona01/G126/seq_dir/hrs/G126P606661F.T0/G126P606661FG6.T0.seq 740 0 740 ABI Length = 740 Plus Strand HSPs: Score = 109 (38.4 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09 Identities = 18/31 (58%), Positives = 21/31 (67%), Frame = +2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDG 450 VF N W V++DPV WPNP FDP R +D G Sbjct: 593 VFPNLWGVHNDPVTWPNPSQFDPYRHIDDKG 685 Score = 100 (35.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09 Identities = 20/58 (34%), Positives = 33/58 (56%), Frame = +3 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFV 422 G ++ P + +P+ AF+ E+MR+ + VP+ PH +T + GY IP+ T V V Sbjct: 63 GTNKTPSTMLREKMPFTCAFIQESMRYRTNVPMGSPHYCQKDTKINGYSIPEGTTVRV 236 >scf/ciona01/G126/seq_dir/hrs/G126P611793R.T0/G126P611793RD11.T0.seq 690 0 690 ABI Length = 690 Minus Strand HSPs: Score = 146 (51.4 bits), Expect = 1.5e-07, P = 1.5e-07 Identities = 26/65 (40%), Positives = 43/65 (66%), Frame = -3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L++++ Sbjct: 229 IISNLWWVHNDPEHWDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGPRNCLGENLARIE 56 Query: 480 LFLFI 484 ++LF+ Sbjct: 55 IYLFL 41 >scf/ciona01/G126/seq_dir/hrs/G126P611105R.T0/G126P611105RC2.T0.seq 728 0 728 ABI Length = 728 Plus Strand HSPs: Score = 146 (51.4 bits), Expect = 2.0e-07, P = 2.0e-07 Identities = 29/106 (27%), Positives = 61/106 (57%), Frame = +1 Query: 23 LLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYG 82 +L+ +S+++ V + + +++ + + A PGP WP++GNA +G+ H + +L+++YG Sbjct: 292 VLIYISMVSIVVIYVKSVKRNKEFM--ALPGPTPWPIVGNAPFLGKQPHKTLLQLSQKYG 465 Query: 83 DVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSG 128 ++++++GS V+L I AL+ G F P R++ G Sbjct: 466 PIYRLKMGSVEAVILCDLDVIRCALISNGRGFFGSP---KIRIIQG 594 >scf/ciona01/G126/seq_dir/hrs/G126P610498F.T0/G126P610498FC7.T0.seq 747 0 747 ABI Length = 747 Minus Strand HSPs: Score = 100 (35.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07 Identities = 18/51 (35%), Positives = 30/51 (58%), Frame = -3 Query: 103 IHQALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 I + LV+QG++F+ RP A+ ++ G + F Y + WK QRR + +R Sbjct: 304 IKKGLVKQGTSFSGRPRIATLEQITEGHGLVFADYGDRWKRQRRFGLATLR 152 Score = 89 (31.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07 Identities = 20/61 (32%), Positives = 30/61 (49%), Frame = -1 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 104 R+ + PPGP PL+G +G + +++YG V +R+G VVL IH Sbjct: 735 RRPNNFPPGPRGLPLLGVIPFLGNHPERRMRKWSKKYGPVMSVRMGRQDWVVLGDYDTIH 556 Query: 105 Q 105 Q Sbjct: 555 Q 553 >scf/ciona01/G126/seq_dir/hrs/G126P611801R.T0/G126P611801RC10.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 139 (48.9 bits), Expect = 1.3e-06, P = 1.3e-06 Identities = 33/104 (31%), Positives = 54/104 (51%), Frame = -2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 VF+N W +++D W P F P R LD DG N + ++ F G R C+GE L++ + Sbjct: 436 VFLNAWGLHNDEKIWETPHLFIPDRHLDPDG--NFVSSKYILPFGAGVRSCLGENLARAE 263 Query: 480 LFL-FISILAHQCDFRANPNEPAKMNFSY-GLTIKPKSFKVNVTLR 523 LFL F++ L + + + N P ++ G+ P F + + R Sbjct: 262 LFLVFVATLQN-FELSVDENNPPSLDEGRSGIIYTPNPFNLIINRR 128 >scf/ciona01/G126/seq_dir/hrs/G126P610840R.T0/G126P610840RG3.T0.seq 743 0 743 ABI Length = 743 Plus Strand HSPs: Score = 135 (47.5 bits), Expect = 4.3e-06, P = 4.3e-06 Identities = 30/90 (33%), Positives = 48/90 (53%), Frame = +3 Query: 434 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDF 493 W P F+P R +D G +S+V+ FS+G R C+GE L+K ++F+F++ + + + Sbjct: 21 WWIPFEFNPNRHIDYQGKYRN--SSKVIPFSIGPRSCLGEALAKQEIFIFLTAILQKYEI 194 Query: 494 RANPNEPAKMNFSYG-LTIKPKSFKVNVTLR 523 P EP LT P +FKV + R Sbjct: 195 NPVPGEPLPSLVGVNSLTCTPANFKVIINER 287 >scf/ciona01/G126/seq_dir/hrs/G126P610441F.T0/G126P610441FD4.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 131 (46.1 bits), Expect = 1.2e-05, P = 1.2e-05 Identities = 24/61 (39%), Positives = 39/61 (63%), Frame = -2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L++++ Sbjct: 205 IISNLWWVHNDPEHWDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGPRNCLGENLARIE 32 Query: 480 L 480 + Sbjct: 31 I 29 >scf/ciona01/G126/seq_dir/hrs/G126P611146F.T0/G126P611146FH4.T0.seq 694 0 694 ABI Length = 694 Minus Strand HSPs: Score = 96 (33.8 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05 Identities = 19/58 (32%), Positives = 32/58 (55%), Frame = -1 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 +VG D +P + +P+ AF+ E++R+ + VP+ H + + GY IPK T V Sbjct: 208 IVGADGIPSSKLREKMPFTCAFIQESVRYITVVPMGSHHYCQEDIKINGYTIPKGTTV 35 Score = 73 (25.7 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05 Identities = 14/46 (30%), Positives = 25/46 (54%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 369 I D+F A +T S +L W +L +P + + E+D+ +G+ L Sbjct: 381 IRDMFVAGSETTSNSLLWCFVLLMHHPKHKETIVKEIDEAMGKTLL 244 >scf/ciona01/G126/seq_dir/hrs/G126P611838R.T0/G126P611838RF12.T0.seq 735 0 735 ABI Length = 735 Minus Strand HSPs: Score = 102 (35.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05 Identities = 20/44 (45%), Positives = 26/44 (59%), Frame = -1 Query: 377 NLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 NLPY A L E R + P+ IP T + +++GY IPKDT V Sbjct: 264 NLPYTKAVLQETYRIRTATPLAIPRRTREDVNLMGYSIPKDTQV 133 Score = 67 (23.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05 Identities = 11/36 (30%), Positives = 22/36 (61%), Frame = -1 Query: 333 DTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 663 ETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 556 >scf/ciona01/G126/seq_dir/hrs/G126P611689F.T0/G126P611689FH1.T0.seq 708 0 708 ABI Length = 708 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 7.0e-05, P = 7.0e-05 Identities = 25/81 (30%), Positives = 44/81 (54%), Frame = +2 Query: 28 SVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQI 87 S+L + + R +++ ++ PPGP P++G + A L+F + +++YG +F + Sbjct: 422 SILVVLLAVMMIYRWHKQKYKNLPPGPTGVPILGCLPFMDTLAELTFTKWSKKYGPIFTV 601 Query: 88 RLGSCPIVVLNGERAIHQALV 108 LG IVVLN AI + V Sbjct: 602 YLGQTRIVVLNSYEAIEEVRV 664 >scf/ciona01/G126/seq_dir/hrs/G126P610830R.T0/G126P610830RG2.T0.seq 745 0 745 ABI Length = 745 Minus Strand HSPs: Score = 121 (42.6 bits), Expect = 0.00017, P = 0.00017 Identities = 21/48 (43%), Positives = 33/48 (68%), Frame = -3 Query: 384 FLY-EAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHD 430 FL+ E R VP+++PHA+ +TS++GY IPKDT+V N W ++ + Sbjct: 173 FLFKEIAR*GPSVPLSLPHASNRDTSIMGYRIPKDTIVLTNIWGIHQE 30 >scf/ciona01/G126/seq_dir/hrs/G126P610683R.T0/G126P610683RE5.T0.seq 723 0 723 ABI Length = 723 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 0.00062, P = 0.00062 Identities = 26/87 (29%), Positives = 48/87 (55%), Frame = +2 Query: 413 HIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIG 472 HIP T V + S++H+P WP+ + FDP RFL ++ + + S + FS G R CIG Sbjct: 50 HIPAGTQVAIFIDSLHHNPSVWPDVDRFDPDRFLPEN-CVGRHPYSFIP-FSAGPRNCIG 223 Query: 473 EELSKMQLFLFISILAHQCDFRANPNE 499 ++ + M+ + ++ + + ++ E Sbjct: 224 QKFALMEEKVLLTQILRKYSIHSHDEE 304 >scf/ciona01/G126/seq_dir/hrs/G126P610353R.T0/G126P610353RB6.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 110 (38.7 bits), Expect = 0.0031, P = 0.0031 Identities = 21/59 (35%), Positives = 38/59 (64%), Frame = +1 Query: 442 PARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP 500 P R LD +G N + +RV+ FS+G R C+GE L++++++LF+ + + NP++P Sbjct: 34 PVRHLDTNG--NLVMLNRVIPFSIGPRNCLGENLARIEIYLFLVSILQKFVVLPNPDDP 204 >scf/ciona01/G126/seq_dir/hrs/G126P610418R.T0/G126P610418RA11.T0.seq 700 0 700 ABI Length = 700 Plus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0049, P = 0.0048 Identities = 18/29 (62%), Positives = 26/29 (89%), Frame = +2 Query: 220 EFRELLSHNEEFGRTVGAGSLVDVMPWLQ 248 EF++L+S NE+FG+ VGAGS +DVMPW++ Sbjct: 416 EFQDLISLNEQFGQVVGAGSQIDVMPWIK 502 >scf/ciona01/G126/seq_dir/hrs/G126P610329R.T0/G126P610329RE12.T0.seq 777 0 777 ABI Length = 777 Plus Strand HSPs: Score = 107 (37.7 bits), Expect = 0.0073, P = 0.0073 Identities = 19/51 (37%), Positives = 32/51 (62%), Frame = +2 Query: 458 SRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYG 508 + V+ FSVG R C+GE+L++M++F+F+ L H+ +F +P N G Sbjct: 119 NHVIPFSVGPRHCLGEQLARMEVFIFLVSLVHKFEFLPDPKATVLYNLKNG 271 >scf/ciona01/G126/seq_dir/hrs/G126P610637R.T0/G126P610637RF11.T0.seq 704 0 704 ABI Length = 704 Plus Strand HSPs: Score = 102 (35.9 bits), Expect = 0.024, P = 0.023 Identities = 19/47 (40%), Positives = 31/47 (65%), Frame = +1 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 LV+QG+AF+ RP+ ++ ++ G + F Y++HWK QRR S +R Sbjct: 196 LVKQGNAFSGRPSISTIDQITEGHGVLFIDYNDHWKRQRRFGLSTLR 336 >scf/ciona01/G126/seq_dir/hrs/G126P611804R.T0/G126P611804RD6.T0.seq 747 0 747 ABI Length = 747 Plus Strand HSPs: Score = 100 (35.2 bits), Expect = 0.043, P = 0.042 Identities = 19/47 (40%), Positives = 30/47 (63%), Frame = +1 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 LV+ G+AF+ RP+ A+ ++ G + F Y++HWK QRR S +R Sbjct: 46 LVKHGNAFSGRPSIATIDQITEGHGVLFIDYNDHWKRQRRFGLSTLR 186 >scf/ciona01/G126/seq_dir/hrs/G126P610549F.T0/G126P610549FA11.T0.seq 714 0 714 ABI Length = 714 Minus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.15, P = 0.14 Identities = 26/63 (41%), Positives = 38/63 (60%), Frame = -2 Query: 463 FSVGKRRCIGEELSKMQLFLFIS-ILAHQCDFRANPNEPAK-MNFSYGLTIK-PKSFKVN 519 FSVG R C+G +L+K +LFLF + +L H +F+ +PN + G T+K PK F V Sbjct: 611 FSVGHRSCLGVQLAKAELFLFYAGVLKHH-EFQVDPNFGLPDWSRDDGGTLKTPKDFTVC 435 Query: 520 VTLR 523 + R Sbjct: 434 IKER 423 >scf/ciona01/G126/seq_dir/hrs/G126P611796R.T0/G126P611796RF9.T0.seq 736 0 736 ABI Length = 736 Minus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.22, Sum P(2) = 0.19 Identities = 20/70 (28%), Positives = 35/70 (50%), Frame = -3 Query: 351 DVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVL 410 ++ R + L QV R + P + ++ +PY AF+ E R+ + P + H T + ++ Sbjct: 680 NIYNRTKLCLSQV--RKKSPPVDNKAYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLN 507 Query: 411 GYHIPKDTVV 420 Y IP T V Sbjct: 506 EYSIPNGTTV 477 Score = 42 (14.8 bits), Expect = 0.22, Sum P(2) = 0.19 Identities = 6/15 (40%), Positives = 12/15 (80%), Frame = -2 Query: 417 DTVVFVNQWSVNHDP 431 D ++VN W+V+++P Sbjct: 72 DWQIYVNLWAVHNNP 28 >scf/ciona01/G126/seq_dir/hrs/G126P611811R.T0/G126P611811RB2.T0.seq 727 0 727 ABI Length = 727 Minus Strand HSPs: Score = 74 (26.0 bits), Expect = 0.26, Sum P(2) = 0.23 Identities = 15/42 (35%), Positives = 22/42 (52%), Frame = -3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDG---LINKDLTS 458 + N W V++DP W P+ F P R LD G ++N+ S Sbjct: 218 IISNLWWVHNDPEHWDEPDVFRPERHLDTKGNLVMLNRGFLS 93 Score = 60 (21.1 bits), Expect = 0.26, Sum P(2) = 0.23 Identities = 8/19 (42%), Positives = 16/19 (84%), Frame = -2 Query: 463 FSVGKRRCIGEELSKMQLF 481 FS+G R C+GE L++++++ Sbjct: 96 FSIGPRNCLGENLARIEIY 40 >scf/ciona01/G126/seq_dir/hrs/G126P610473F.T0/G126P610473FG5.T0.seq 740 0 740 ABI Length = 740 Plus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.26, P = 0.23 Identities = 36/104 (34%), Positives = 48/104 (46%), Frame = +1 Query: 28 SVLATVHVGQRLLRQRRRQLRSAPPGPFAW-PLIGNAAAVGQAAH-LSFARLARRYGDVF 85 +VL V G+R + R Q SA G W P G G+A +S + R G VF Sbjct: 391 AVLVPVACGRRPYKTTRNQRNSAGEG---WLPSRGLFPHAGKAKERMSMKWSSSRLGPVF 561 Query: 86 QIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSGGRS 131 RLG+ ++VLNG I ++ + A A R A RV G S Sbjct: 562 YARLGASTVLVLNGYDVIKRSTRAETLAMAGRVESA**RVDDGNMS 699 >scf/ciona01/G126/seq_dir/hrs/G126P611187R.T0/G126P611187RF3.T0.seq 737 0 737 ABI Length = 737 Minus Strand HSPs: Score = 85 (29.9 bits), Expect = 0.40, Sum P(2) = 0.33 Identities = 13/46 (28%), Positives = 29/46 (63%), Frame = -3 Query: 455 DLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP 500 ++ +V+ FS+G R C+GE L++ ++F+F+ + + + P +P Sbjct: 633 EILVKVIPFSIGPRSCLGEALARQEMFIFLIAILQKYEINPVPGKP 496 Score = 46 (16.2 bits), Expect = 0.40, Sum P(2) = 0.33 Identities = 12/23 (52%), Positives = 13/23 (56%), Frame = -1 Query: 1 MGTSLSPNDPWPLNPLSI--QQTT 22 MG+S PWP NP I QTT Sbjct: 725 MGSSQRSQSPWP-NPSKI*SAQTT 657 >scf/ciona01/G126/seq_dir/hrs/G126P611892F.T0/G126P611892FB6.T0.seq 710 0 710 ABI Length = 710 Minus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.42, P = 0.34 Identities = 19/56 (33%), Positives = 33/56 (58%), Frame = -2 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAIHQ 105 PPG P++G +G++AH A+ +R ++G + +R GS +VVL+ IH+ Sbjct: 460 PPGVRGIPVMGALPYLGKSAHTVMAKWSRDKFGPIMSVRFGSDDVVVLSTYDVIHE 293 >scf/ciona01/G126/seq_dir/hrs/G126P610698R.T0/G126P610698RE11.T0.seq 689 0 689 ABI Length = 689 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.68, P = 0.49 Identities = 14/40 (35%), Positives = 24/40 (60%), Frame = +2 Query: 326 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 D+F A +T + + W+LL YPD+Q ++ E+ V+G Sbjct: 389 DLFNAGTETSTNVILWMLLALMHYPDIQEKLYQEIHDVIG 508 >scf/ciona01/G126/seq_dir/hrs/G126P610360F.T0/G126P610360FE6.T0.seq 736 0 736 ABI Length = 736 Minus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.94, P = 0.61 Identities = 27/96 (28%), Positives = 45/96 (46%), Frame = -3 Query: 10 PWPLNPLS-----IQQTTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAA 64 P+P N L I +T + LSV ++ R + ++ PPGP PL+G Sbjct: 368 PFPANMLQSMFNEINVSTAFVFLSVFLALYYWYR-------RPKNYPPGPRGIPLLGFLP 210 Query: 65 AVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQ 105 +G + + +++YG V +R+G V+L I Q Sbjct: 209 FLGNYPERTMYKWSKKYGPVMSVRMGRQDWVILGDHETIRQ 87 >scf/ciona01/G126/seq_dir/hrs/G126P609907R.T0/G126P609907RD9.T0.seq 753 0 753 ABI Length = 753 Minus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.96, P = 0.62 Identities = 19/61 (31%), Positives = 31/61 (50%), Frame = -2 Query: 360 LDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTV 419 L QV R + P + ++ +PY AF+ E R+ + P + H T + ++ Y IP T Sbjct: 581 LSQV--RKKSPXVDNKAYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNEYSIPNGTT 408 Query: 420 V 420 V Sbjct: 407 V 405 >scf/ciona01/G126/seq_dir/hrs/G126P610795R.T0/G126P610795RH8.T0.seq 720 0 720 ABI Length = 720 Plus Strand HSPs: Score = 77 (27.1 bits), Expect = 1.5, Sum P(2) = 0.77 Identities = 17/49 (34%), Positives = 27/49 (55%), Frame = +1 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLN 98 PPG P++G G+ AH + + +R +YG + +R+G VVLN Sbjct: 280 PPGVRGVPVLGALPFFGKFAHKTILQWSREKYGKIMSVRMGPNDAVVLN 426 Score = 49 (17.2 bits), Expect = 1.5, Sum P(2) = 0.77 Identities = 13/36 (36%), Positives = 19/36 (52%), Frame = +2 Query: 105 QALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEH 140 +A V+Q F+ RP+ R +SG +AFG H Sbjct: 599 KAFVKQHLVFSSRPSIRMIRELSGV-VLAFGFCPGH 703 >scf/ciona01/G126/seq_dir/hrs/G126P610638F.T0/G126P610638FA5.T0.seq 723 0 723 ABI Length = 723 Plus Strand HSPs: Score = 85 (29.9 bits), Expect = 2.0, P = 0.87 Identities = 16/49 (32%), Positives = 28/49 (57%), Frame = +2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCM 372 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R M Sbjct: 560 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKARRALM 706 >scf/ciona01/G126/seq_dir/hrs/G126P610351F.T0/G126P610351FB10.T0.seq 741 0 741 ABI Length = 741 Plus Strand HSPs: Score = 85 (29.9 bits), Expect = 2.0, P = 0.87 Identities = 24/91 (26%), Positives = 45/91 (49%), Frame = +2 Query: 444 RFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKM 503 R +DKDG + +V+ F +G R C+GE+L ++++ LF++ + + +P Sbjct: 38 RHIDKDGKFVP--SKKVISFGIGARSCLGEKLGRIEICLFLANIIKTFEILPDPKSNRLP 211 Query: 504 NFSYGLT---IKPKSFKVNVTLRESMELLDSAV 533 + G+ P FKV + R + D A+ Sbjct: 212 SIDRGIAGFLYIPYPFKVVMKSRI*DWICDGAI 310 >scf/ciona01/G126/seq_dir/hrs/G126P611558F.T0/G126P611558FD2.T0.seq 705 0 705 ABI Length = 705 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.6, P = 0.92 Identities = 19/62 (30%), Positives = 33/62 (53%), Frame = +2 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYG-DVFQIRLGSCPIVVLNGERAI 103 R+ ++ PPGP P++G +G+ ++LA +Y V R+G ++LN AI Sbjct: 371 RKPKNFPPGPRGLPILGIVPYLGKHPEKVLSKLADKYNPSVMSFRMGRMDWIILNDIEAI 550 Query: 104 HQ 105 +Q Sbjct: 551 NQ 556 >scf/ciona01/G126/seq_dir/hrs/G126P610369F.T0/G126P610369FD4.T0.seq 715 0 715 ABI Length = 715 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.6, P = 0.93 Identities = 19/62 (30%), Positives = 33/62 (53%), Frame = +2 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYG-DVFQIRLGSCPIVVLNGERAI 103 R+ ++ PPGP P++G +G+ ++LA +Y V R+G ++LN AI Sbjct: 470 RKPKNFPPGPRGLPILGIVPYLGKHPEKVLSKLADKYNPSVMSFRMGRMDWIILNDIEAI 649 Query: 104 HQ 105 +Q Sbjct: 650 NQ 655 >scf/ciona01/G126/seq_dir/hrs/G126P610578R.T0/G126P610578RC1.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.6, P = 0.93 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 316 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 450 >scf/ciona01/G126/seq_dir/hrs/G126P610442R.T0/G126P610442RC6.T0.seq 754 0 754 ABI Length = 754 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.7, P = 0.93 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 367 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 501 >scf/ciona01/G126/seq_dir/hrs/G126P611335F.T0/G126P611335FH2.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.4, P = 0.97 Identities = 13/42 (30%), Positives = 27/42 (64%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A +T ++ ++W LL YP+ Q +++ E+ +V+G Sbjct: 547 VRDLFEAGTETTTSTIRWALLCMLHYPETQDKLREEIMKVLG 672 >scf/ciona01/G126/seq_dir/hrs/G126P611676F.T0/G126P611676FE8.T0.seq 966 0 966 ABI Length = 966 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 4.1, P = 0.98 Identities = 17/56 (30%), Positives = 29/56 (51%), Frame = +2 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 G +P LP + AF+ E R+ + VP+++ H + + + G+ I KDT V Sbjct: 38 GEHVIPSADHGEKLPLLPAFIQELYRYRTIVPMSLQHRASEDVEIGGHLITKDTTV 205 >scf/ciona01/G126/seq_dir/hrs/G126P610373F.T0/G126P610373FF4.T0.seq 708 0 708 ABI Length = 708 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.3, P = 0.99 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = +3 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 348 LKDIFVAGIETSTSTIIWALYYLIRHPEIQDKVHREMDAELGKAR 482 >scf/ciona01/G126/seq_dir/hrs/G126P611213R.T0/G126P611213RG1.T0.seq 745 0 745 ABI Length = 745 Minus Strand HSPs: Score = 81 (28.5 bits), Expect = 5.8, P = 1.00 Identities = 17/52 (32%), Positives = 27/52 (51%), Frame = -2 Query: 318 ENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 369 E + I D+ A +T S + WLL+ D +V E+DQV+G+ +L Sbjct: 426 EELVVIIRDLVSAGSETTSNTIAWLLIALMHNQDHLRKVVKEIDQVMGKYKL 271 >scf/ciona01/G126/seq_dir/hrs/G126P610534R.T0/G126P610534RH1.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 9.5, P = 1.00 Identities = 13/34 (38%), Positives = 22/34 (64%), Frame = +1 Query: 323 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRV 356 +I+D+F A +T +T L W ++ YPD+Q R+ Sbjct: 616 SISDLFIAGTETTTTTLLWCMIAMLHYPDLQARI 717 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.137 0.417 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 543 543 10. 74 3 13 22 0.064 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_26.seq Title: /seqs/databases/ciona/ciona_26.seq Release date: unknown Posted date: 3:09 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 76,962,206 # of sequences in database: 100,000 # of database sequences satisfying E: 43 No. of states in DFA: 545 (58 KB) Total size of DFA: 104 KB (128 KB) Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.20u 0.15s 13.35t Elapsed: 00:00:17 Total cpu time: 13.25u 0.16s 13.41t Elapsed: 00:00:17 Start: Mon Apr 1 21:58:24 2002 End: Mon Apr 1 21:58:41 2002