TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 3_CYP1B1_NM_000104 (543 letters) Database: /seqs/databases/ciona/ciona_22.seq 100,000 sequences; 78,616,084 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P608515F.T0/G126P6085... -1 272 1.1e-22 1 scf/ciona01/G126/seq_dir/hrs/G126P608780R.T0/G126P6087... -2 141 1.0e-15 2 scf/ciona01/G126/seq_dir/hrs/G126P608782R.T0/G126P6087... +3 175 2.0e-11 1 scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P6063... +1 133 2.7e-11 2 scf/ciona01/G126/seq_dir/hrs/G126P609056R.T0/G126P6090... +2 174 7.5e-11 1 scf/ciona01/G126/seq_dir/hrs/G126P609268F.T0/G126P6092... -3 164 8.0e-10 1 scf/ciona01/G126/seq_dir/hrs/G126P608491F.T0/G126P6084... +2 164 1.4e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P609267F.T0/G126P6092... +2 116 8.0e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P606529R.T0/G126P6065... -1 140 1.0e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P608339R.T0/G126P6083... -2 139 1.5e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P609153F.T0/G126P6091... +2 138 1.8e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P608847F.T0/G126P6088... +3 88 6.6e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P608432F.T0/G126P6084... -1 123 8.7e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P608882R.T0/G126P6088... +2 123 0.00010 1 scf/ciona01/G126/seq_dir/hrs/G126P608901F.T0/G126P6089... -1 122 0.00014 1 scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P6063... -1 109 0.0041 1 scf/ciona01/G126/seq_dir/hrs/G126P608524F.T0/G126P6085... +3 105 0.012 1 scf/ciona01/G126/seq_dir/hrs/G126P608732R.T0/G126P6087... -2 99 0.049 1 scf/ciona01/G126/seq_dir/hrs/G126P607984F.T0/G126P6079... +1 96 0.11 1 scf/ciona01/G126/seq_dir/hrs/G126P609254R.T0/G126P6092... -2 72 0.12 2 scf/ciona01/G126/seq_dir/hrs/G126P608944R.T0/G126P6089... +2 94 0.18 1 scf/ciona01/G126/seq_dir/hrs/G126P607842F.T0/G126P6078... -1 93 0.23 1 scf/ciona01/G126/seq_dir/hrs/G126P608254R.T0/G126P6082... -3 82 0.25 2 scf/ciona01/G126/seq_dir/hrs/G126P608373R.T0/G126P6083... +1 92 0.30 1 scf/ciona01/G126/seq_dir/hrs/G126P608718R.T0/G126P6087... +2 90 0.44 1 scf/ciona01/G126/seq_dir/hrs/G126P608171R.T0/G126P6081... +1 90 0.44 1 scf/ciona01/G126/seq_dir/hrs/G126P608248F.T0/G126P6082... +3 89 0.51 1 scf/ciona01/G126/seq_dir/hrs/G126P608029F.T0/G126P6080... -3 89 0.52 1 scf/ciona01/G126/seq_dir/hrs/G126P608824R.T0/G126P6088... -2 78 0.62 2 scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P6089... +1 88 0.63 1 scf/ciona01/G126/seq_dir/hrs/G126P609299F.T0/G126P6092... -2 87 0.70 1 scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P6089... +2 87 0.73 1 scf/ciona01/G126/seq_dir/hrs/G126P607987R.T0/G126P6079... -3 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P609032F.T0/G126P6090... -2 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P608592R.T0/G126P6085... +1 84 0.93 1 scf/ciona01/G126/seq_dir/hrs/G126P608855F.T0/G126P6088... -2 81 0.997 1 scf/ciona01/G126/seq_dir/hrs/G126P608045R.T0/G126P6080... +2 79 0.99992 1 scf/ciona01/G126/seq_dir/hrs/G126P608147F.T0/G126P6081... -1 79 0.99993 1 >scf/ciona01/G126/seq_dir/hrs/G126P608515F.T0/G126P608515FG6.T0.seq 690 0 690 ABI Length = 690 Minus Strand HSPs: Score = 272 (95.7 bits), Expect = 1.1e-22, P = 1.1e-22 Identities = 55/130 (42%), Positives = 78/130 (60%), Frame = -1 Query: 369 LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVN 428 +P M Q +PY+ AF+ E RF + + IPH T + + GY IPK T V N W V+ Sbjct: 435 VPNMSHQEKMPYLRAFIQEVHRFQTIAVLNIPHCVTEDCILYGYRIPKGTPVMSNIWFVH 256 Query: 429 HDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFIS-IL 487 +DP W P+ F P R LD DG ++RV+ FSVG R C+G +L+K +LFLF + +L Sbjct: 255 NDPAHWQEPQKFRPERHLDGDGKFIP--SNRVIPFSVGHRSCLGVQLAKAELFLFYAGVL 82 Query: 488 AHQCDFRANPN 498 H +F+ +PN Sbjct: 81 KHH-EFQVDPN 52 >scf/ciona01/G126/seq_dir/hrs/G126P608780R.T0/G126P608780RD7.T0.seq 751 0 751 ABI Length = 751 Minus Strand HSPs: Score = 141 (49.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15 Identities = 33/75 (44%), Positives = 46/75 (61%), Frame = -2 Query: 442 PARF-LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLF-ISILAHQCDFRANPNE 499 P RF L + G+ NK L RVM+F G+RRC GE L++MQLFLF +SIL C R + Sbjct: 258 PERFILSETGVFNKGLADRVMLFGGGRRRCAGEALARMQLFLFSVSIL-RSCTIRRVDHS 82 Query: 500 PAKMNFSYGLTIKPKS 515 + G+++ PK+ Sbjct: 81 DVLPDALPGISLIPKN 34 Score = 124 (43.7 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15 Identities = 23/51 (45%), Positives = 31/51 (60%), Frame = -1 Query: 390 RFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENF 440 R SFVP +PHA +T++ GY IP TV+ ++ SVNHD W +P F Sbjct: 703 RHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVNHDHTLWDSPGEF 551 >scf/ciona01/G126/seq_dir/hrs/G126P608782R.T0/G126P608782RC8.T0.seq 735 0 735 ABI Length = 735 Plus Strand HSPs: Score = 175 (61.6 bits), Expect = 2.0e-11, P = 2.0e-11 Identities = 37/90 (41%), Positives = 53/90 (58%), Frame = +3 Query: 377 NLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPN 436 NLP +F E R VP+++PH ++ +TS++GY IPK T V N W ++HD W N Sbjct: 441 NLP---SF-QEINRMRPNVPLSVPHYSSTDTSIMGYRIPKATTVLTNIWGIHHDEKIWTN 608 Query: 437 PENFDPARFLDKDGLINKDLTSRVMIFSVG 466 P F+P R LD G K + +VM F++G Sbjct: 609 PYEFNPERHLDVHGNFVK--SKKVMHFNIG 692 >scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P606393FD9.T0.seq 750 0 750 ABI Length = 750 Plus Strand HSPs: Score = 133 (46.8 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11 Identities = 35/109 (32%), Positives = 60/109 (55%), Frame = +1 Query: 418 TVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELS 476 T V N + DP W NP FD R ++KDG K + S+ +I F +G R CIGE+L+ Sbjct: 274 T*VLPNIHGCHSDPNIWKNPSKFDIYRHINKDG---KFVPSKKVIPFGIGARACIGEKLA 444 Query: 477 KMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTIKPKSFKVNVTLRES 525 +++ ++F++ + + + ++P P + GL P FKV + R++ Sbjct: 445 RIETYVFLTNIVKRFEILSDPESKRRPPLDDGVIGLVQAPLPFKVVLKPRKT 600 Score = 91 (32.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11 Identities = 20/66 (30%), Positives = 31/66 (46%), Frame = +3 Query: 364 VGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVN 423 +G P + + LP + AF+ E RF + + + H TT + + G+ IPK T V Sbjct: 51 IGEQAFPSVDHRKKLPLLEAFIQEIFRFKTLILLGGQHLTTKDVEINGHFIPKSTKVVKG 230 Query: 424 QWSVNH 429 S H Sbjct: 231 MSSEPH 248 >scf/ciona01/G126/seq_dir/hrs/G126P609056R.T0/G126P609056RH11.T0.seq 765 0 765 ABI Length = 765 Plus Strand HSPs: Score = 174 (61.3 bits), Expect = 7.5e-11, P = 7.5e-11 Identities = 39/106 (36%), Positives = 59/106 (55%), Frame = +2 Query: 377 NLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPN 436 NLP +F E R VP+++PH ++ +TS++GY IPK T V N W ++HD W N Sbjct: 452 NLP---SF-QEINRMRPNVPLSVPHYSSTDTSIMGYRIPKATTVLTNIWGIHHDEXIWTN 619 Query: 437 PENFDPARF--LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 P F+P R +N+ +V R C+G++L+ M+LFL Sbjct: 620 PYEFNPERASRCSWAXXVNR---KKVCTSISDWRECLGQQLANMELFL 754 >scf/ciona01/G126/seq_dir/hrs/G126P609268F.T0/G126P609268FF8.T0.seq 717 0 717 ABI Length = 717 Minus Strand HSPs: Score = 164 (57.7 bits), Expect = 8.0e-10, P = 8.0e-10 Identities = 30/82 (36%), Positives = 52/82 (63%), Frame = -3 Query: 417 DTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELS 476 D ++VN W+V+++P W P F P R LD G N ++ V+ FSVG R C+GE+L+ Sbjct: 298 DWQIYVNLWAVHNNPDVWDEPNKFKPERHLDDKG--NFVQSNHVIPFSVGPRHCLGEQLA 125 Query: 477 KMQLFLFISILAHQCDFRANPN 498 +M++F+++ L + +F +P+ Sbjct: 124 RMEIFIYLVSLVQKFEFLPDPD 59 >scf/ciona01/G126/seq_dir/hrs/G126P608491F.T0/G126P608491FB3.T0.seq 756 0 756 ABI Length = 756 Plus Strand HSPs: Score = 164 (57.7 bits), Expect = 1.4e-09, P = 1.4e-09 Identities = 37/97 (38%), Positives = 53/97 (54%), Frame = +2 Query: 423 NQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFL 482 N W+V++DPV W P F P R LD DG N V+ FSVG R +GE+L++M++F+ Sbjct: 257 NLWAVHNDPVVWDEPNKFKPERHLDADG--NFVQLKHVIPFSVGPRDGLGEQLARMEVFI 430 Query: 483 FISILAHQCDFRANPNEPA---KMNFSYGLTIKPKSFKV 518 F+ L + +F +P N S G P FK+ Sbjct: 431 FLVSLVQKFEFLPDPKAKVLSDNENGSSGAAFLPLPFKI 547 >scf/ciona01/G126/seq_dir/hrs/G126P609267F.T0/G126P609267FD8.T0.seq 731 0 731 ABI Length = 731 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07 Identities = 20/58 (34%), Positives = 34/58 (58%), Frame = +2 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 V G +++P ++ +PY AF+ E R+ + VP+++ H T + + GY IPK T V Sbjct: 194 VSGPEKIPAFENKSKMPYTSAFIQEIYRYRTLVPLSVTHMTNEDAHISGYTIPKGTTV 367 Score = 67 (23.6 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07 Identities = 11/24 (45%), Positives = 14/24 (58%), Frame = +2 Query: 423 NQWSVNHDPVKWPNPENFDPARFL 446 N W+V++DP W P F P R L Sbjct: 659 NLWAVHNDPEVWDEPNKFKPERHL 730 >scf/ciona01/G126/seq_dir/hrs/G126P606529R.T0/G126P606529RH11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 140 (49.3 bits), Expect = 1.0e-06, P = 1.0e-06 Identities = 33/104 (31%), Positives = 55/104 (52%), Frame = -1 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 VF+N W +++D W P F P R LD DG N + ++ F G R C+GE L++ + Sbjct: 548 VFLNAWGLHNDEKIWETPHLFIPDRHLDPDG--NFVSSKYILPFGAGVRSCLGENLARAE 375 Query: 480 LFL-FISILAHQCDFRANPNEPAKMNFSY-GLTIKPKSFKVNVTLR 523 LFL F++ L + + + N+P ++ G+ P F + + R Sbjct: 374 LFLVFVATLQN-FELSVDENKPPSLDEGRSGIIYTPNPFNLIINQR 240 >scf/ciona01/G126/seq_dir/hrs/G126P608339R.T0/G126P608339RE8.T0.seq 754 0 754 ABI Length = 754 Minus Strand HSPs: Score = 139 (48.9 bits), Expect = 1.5e-06, P = 1.5e-06 Identities = 44/163 (26%), Positives = 78/163 (47%), Frame = -2 Query: 16 LSIQQTTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFA 75 LSI+ T + ++ + ++V L +R Q +PPGP PL+G + + + Sbjct: 504 LSIKSTVDIFIVVAIG-LYVTWHLWNKRSPQ---SPPGPRGIPLLGAITEIRKHPEHAMM 337 Query: 76 RLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSGGRSMAFG 135 + ++YG V +RLG ++VL A H+ALV+ + ADRP + V GG+ + Sbjct: 336 KWNQQYGPVCMVRLGLKDVLVLGSYEAAHEALVKN-THIADRPTH-NIEVFYGGKGILMI 163 Query: 136 HYSEHWKVQRRAAHSMMRNFFTRQPRSRQVLEGHVLSEARELV 178 + + QRR + +R + R+ LE +L +L+ Sbjct: 162 NSGSFHQEQRRFGLNTLREY----GMGRRALEPTILXYVNDLL 46 >scf/ciona01/G126/seq_dir/hrs/G126P609153F.T0/G126P609153FD7.T0.seq 729 0 729 ABI Length = 729 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 1.8e-06, P = 1.8e-06 Identities = 25/63 (39%), Positives = 41/63 (65%), Frame = +2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 + N W V++DP W P+ F P R LD +G N + +RV+ FS+G R C+GE L++++ Sbjct: 470 IISNLWWVHNDPEHWDEPDVFRPERHLDTNG--NLVMLNRVIPFSIGPRNCLGENLARIE 643 Query: 480 LFL 482 ++L Sbjct: 644 IYL 652 >scf/ciona01/G126/seq_dir/hrs/G126P608847F.T0/G126P608847FC2.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05 Identities = 15/31 (48%), Positives = 21/31 (67%), Frame = +3 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDG 450 + N ++V++DPV WP P FD R +DKDG Sbjct: 507 IIPNIYAVHNDPVIWPEPSKFDIYRHIDKDG 599 Score = 80 (28.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05 Identities = 18/48 (37%), Positives = 27/48 (56%), Frame = +1 Query: 373 GDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 GD NLP + AF+ E R + P+ + T + + G+ IPK+TVV Sbjct: 280 GD--NLPLLQAFIQELYRCITIAPLGLQRTNTEDVEIGGHFIPKNTVV 417 >scf/ciona01/G126/seq_dir/hrs/G126P608432F.T0/G126P608432FH12.T0.seq 682 0 682 ABI Length = 682 Minus Strand HSPs: Score = 123 (43.3 bits), Expect = 8.7e-05, P = 8.7e-05 Identities = 30/88 (34%), Positives = 48/88 (54%), Frame = -1 Query: 269 SNFILDKFLRHCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIF 328 +N L + H +S + G RD++D+FI + K G L+ + + A TD+F Sbjct: 376 NNIKLHRTREHRQSYKHGVI-RDLVDSFIAESIDKP-------GQLLNDDVIMALTTDVF 221 Query: 329 GASQDTLSTALQWLLLLFTRYPDVQTRV 356 GA QDT+ST LQW+ + R+ + Q +V Sbjct: 220 GAGQDTMSTTLQWIFVYMMRFKECQKKV 137 >scf/ciona01/G126/seq_dir/hrs/G126P608882R.T0/G126P608882RC8.T0.seq 737 0 737 ABI Length = 737 Plus Strand HSPs: Score = 123 (43.3 bits), Expect = 0.00010, P = 0.00010 Identities = 26/62 (41%), Positives = 40/62 (64%), Frame = +2 Query: 460 VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTIKPKSF 516 V+ FSVG R C+GE+L++M++F+F+ L + +F +P+E P N SYG PK F Sbjct: 53 VIPFSVGPRHCLGEQLARMEVFIFLVSLVQKFEFLPDPDEVNLPDIENGSYGPLCAPKPF 232 Query: 517 KV 518 K+ Sbjct: 233 KM 238 >scf/ciona01/G126/seq_dir/hrs/G126P608901F.T0/G126P608901FE8.T0.seq 736 0 736 ABI Length = 736 Minus Strand HSPs: Score = 122 (42.9 bits), Expect = 0.00014, P = 0.00014 Identities = 40/142 (28%), Positives = 74/142 (52%), Frame = -1 Query: 240 LVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAP-RDMMDAFIL 298 L+ P+L + + ++E + +++ FS ++++ R E P AP R+ +D + Sbjct: 457 LLKYFPFLYKWSQEGKLYYKECDSVHK-FSTSLINR--RKQELGNPDIAPKREFLDFLDM 287 Query: 299 SAEKKAAGDSHGGGARLDLENVPATI-TDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQ 357 + A DS+G G L + A + T +FG S DT ++A+ W L ++ P+VQ + Sbjct: 286 LLQ---ARDSNGLG--LTTSEICAEVDTFLFG-SHDTTASAISWFLYCISQNPEVQNKCF 125 Query: 358 AELDQVVGRDRLPCMGDQPNLPYV 381 E+ QV+G + D +LPY+ Sbjct: 124 QEITQVLGDRKNVRWSDLSSLPYL 53 >scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P606393FH8.T0.seq 727 0 727 ABI Length = 727 Minus Strand HSPs: Score = 109 (38.4 bits), Expect = 0.0041, P = 0.0041 Identities = 26/74 (35%), Positives = 37/74 (50%), Frame = -1 Query: 347 TRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTAN 406 T +P + A+ D GRD + + NLPY A L E R + P+ IP T + Sbjct: 355 TLHPITLSTTYAD*DYFKGRDGKSSL--KTNLPYTKAVLQETYRIRTVTPLAIPRRTRGD 182 Query: 407 TSVLGYHIPKDTVV 420 +++GY IPK T V Sbjct: 181 VNLMGYFIPKHTEV 140 >scf/ciona01/G126/seq_dir/hrs/G126P608524F.T0/G126P608524FC6.T0.seq 741 0 741 ABI Length = 741 Plus Strand HSPs: Score = 105 (37.0 bits), Expect = 0.012, P = 0.012 Identities = 20/47 (42%), Positives = 31/47 (65%), Frame = +3 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 LV+QG+AF+ RP+ A+ ++ G + F Y++HWK QRR S +R Sbjct: 492 LVKQGNAFSGRPSIATIDQITEGHGVLFIDYNDHWKRQRRFGLSTLR 632 >scf/ciona01/G126/seq_dir/hrs/G126P608732R.T0/G126P608732RE9.T0.seq 686 0 686 ABI Length = 686 Minus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.051, P = 0.049 Identities = 19/47 (40%), Positives = 31/47 (65%), Frame = -2 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 LV+QG+AF+ RP+ ++ ++ G + F Y++HWK QRR S +R Sbjct: 613 LVKQGNAFSGRPSKSTIDQITEGHGVLFIDYNDHWKRQRRFGLSTLR 473 >scf/ciona01/G126/seq_dir/hrs/G126P607984F.T0/G126P607984FD9.T0.seq 708 0 708 ABI Length = 708 Plus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.12, P = 0.11 Identities = 21/66 (31%), Positives = 39/66 (59%), Frame = +1 Query: 459 RVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP-AKMNFSYGLTIKPKSFK 517 RV+ FS+G C+GE L++++++LF+ + + NP++P M + G P S+ Sbjct: 37 RVIPFSIGPXNCLGENLARIEIYLFLVSILQKFVVLPNPDDPNPPMTCNPGAINAPGSY- 213 Query: 518 VNVTLRE 524 N+ L+E Sbjct: 214 -NIVLKE 231 >scf/ciona01/G126/seq_dir/hrs/G126P609254R.T0/G126P609254RB2.T0.seq 702 0 702 ABI Length = 702 Minus Strand HSPs: Score = 72 (25.3 bits), Expect = 0.13, Sum P(2) = 0.12 Identities = 13/35 (37%), Positives = 19/35 (54%), Frame = -2 Query: 318 ENVPATITDIFGASQDTLSTALQWLLLLFTRYPDV 352 E + + D+F A DT ST + W +L +PDV Sbjct: 347 EQLVPLVRDLFMAGTDTSSTTITWAILFLASFPDV 243 Score = 65 (22.9 bits), Expect = 0.13, Sum P(2) = 0.12 Identities = 13/43 (30%), Positives = 24/43 (55%), Frame = -3 Query: 353 QTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFV 395 Q R+ E+D ++G + P + + +PYV A L + F ++V Sbjct: 241 QGRIHEEIDTIIGYHQRPSISFEDKMPYVRAVLQVNVIFVNYV 113 >scf/ciona01/G126/seq_dir/hrs/G126P608944R.T0/G126P608944RG3.T0.seq 718 0 718 ABI Length = 718 Plus Strand HSPs: Score = 94 (33.1 bits), Expect = 0.20, P = 0.18 Identities = 17/43 (39%), Positives = 27/43 (62%), Frame = +2 Query: 323 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 +I+D+F A +T +T L W ++ YPD+Q R+ EL Q +G Sbjct: 101 SISDLFIAGTETTTTTLLWCMIAMLHYPDLQARIYNELMQEIG 229 >scf/ciona01/G126/seq_dir/hrs/G126P607842F.T0/G126P607842FC6.T0.seq 728 0 728 ABI Length = 728 Minus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.26, P = 0.23 Identities = 16/40 (40%), Positives = 27/40 (67%), Frame = -1 Query: 220 EFRELLSHNEEFGRTVGAGSLVDVMPWL--QYFPNPVRTV 257 +FR+LLS N+EFG+ + G ++D MPW+ ++ P R + Sbjct: 371 DFRKLLSMNKEFGKVIELGPIIDAMPWITVRFLHFPARLI 252 >scf/ciona01/G126/seq_dir/hrs/G126P608254R.T0/G126P608254RG3.T0.seq 740 0 740 ABI Length = 740 Minus Strand HSPs: Score = 82 (28.9 bits), Expect = 0.28, Sum P(2) = 0.25 Identities = 17/60 (28%), Positives = 32/60 (53%), Frame = -3 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQ 424 G + +P + +P+ AF+ E+MR+ + VP+ H + + Y IPK T V++ + Sbjct: 411 GANGIPSSILREKMPFTCAFIQESMRYCTVVPMGSQHYCQEDIKIDEYTIPKGTTVWLTK 232 Score = 51 (18.0 bits), Expect = 0.28, Sum P(2) = 0.25 Identities = 11/39 (28%), Positives = 20/39 (51%), Frame = -1 Query: 328 FGASQDTLSTALQWLLLLFTRYP-DVQTRVQAELDQVVGR 366 F S+ T S +L W ++ +P Q E+D+ +G+ Sbjct: 578 FAGSEST-SNSLLWCFVILLHHPPSTQKHYVKEIDEAMGK 462 >scf/ciona01/G126/seq_dir/hrs/G126P608373R.T0/G126P608373RA8.T0.seq 747 0 747 ABI Length = 747 Plus Strand HSPs: Score = 92 (32.4 bits), Expect = 0.35, P = 0.30 Identities = 20/57 (35%), Positives = 33/57 (57%), Frame = +1 Query: 442 PARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPN 498 P R +D DG N + ++ FSVG R C+GE+++K ++F+FI L +P+ Sbjct: 37 PQRHIDIDG--NFVPSHNILPFSVGSRYCMGEKIAKTEIFIFIVSLLQNFTVHRDPS 201 >scf/ciona01/G126/seq_dir/hrs/G126P608718R.T0/G126P608718RF10.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 90 (31.7 bits), Expect = 0.57, P = 0.44 Identities = 23/67 (34%), Positives = 36/67 (53%), Frame = +2 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARR-YGDVFQIRLGSCPIVVLNGERAIHQALVQQ 110 PG +P++G +G+ + + G +F IRLG+ ++VLNG AI +AL Q+ Sbjct: 290 PGKDGFPIVGCFPMLGKHKERVLMKWSTSSLGPMFYIRLGTSKVLVLNGYNAIKEALEQK 469 Query: 111 GSAFADR 117 A A R Sbjct: 470 PLAIAGR 490 >scf/ciona01/G126/seq_dir/hrs/G126P608171R.T0/G126P608171RB1.T0.seq 730 0 730 ABI Length = 730 Plus Strand HSPs: Score = 90 (31.7 bits), Expect = 0.57, P = 0.44 Identities = 24/67 (35%), Positives = 36/67 (53%), Frame = +1 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARR-YGDVFQIRLGSCPIVVLNGERAIHQALVQQ 110 PG +P++G +G+ + + G VF IRLG+ ++VLNG AI +AL Q+ Sbjct: 253 PGKDGFPIVGCFPMLGKHKKKVLMKWSTSSLGPVFYIRLGTSKVLVLNGYDAIKEALEQK 432 Query: 111 GSAFADR 117 A A R Sbjct: 433 PLAIAGR 453 >scf/ciona01/G126/seq_dir/hrs/G126P608248F.T0/G126P608248FH5.T0.seq 708 0 708 ABI Length = 708 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.72, P = 0.51 Identities = 18/47 (38%), Positives = 28/47 (59%), Frame = +3 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMR 153 LV+QG++F+ RP+ A +S G + F Y + WK QRR + +R Sbjct: 132 LVKQGNSFSGRPSIAILDQISEGHGILFIDYDKQWKRQRRFGLATLR 272 >scf/ciona01/G126/seq_dir/hrs/G126P608029F.T0/G126P608029FC5.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.73, P = 0.52 Identities = 15/59 (25%), Positives = 36/59 (61%), Frame = -3 Query: 427 VNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFIS 485 ++ D + NP+ F+ R ++ + +++ F +G R C+GE+L+++++FLF++ Sbjct: 561 IHQDEKLFKNPKEFNIYRHIEGGKFV---FNKKIIPFGIGARSCLGEKLARLEVFLFLA 394 >scf/ciona01/G126/seq_dir/hrs/G126P608824R.T0/G126P608824RB6.T0.seq 735 0 735 ABI Length = 735 Minus Strand HSPs: Score = 78 (27.5 bits), Expect = 0.97, Sum P(2) = 0.62 Identities = 13/36 (36%), Positives = 21/36 (58%), Frame = -2 Query: 411 GYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFL 446 GY +PK T + ++++H W + E F+P RFL Sbjct: 692 GYSVPKGTQAIIFGYTIHHPSRLWEDEERFEPDRFL 585 Score = 50 (17.6 bits), Expect = 0.97, Sum P(2) = 0.62 Identities = 12/35 (34%), Positives = 17/35 (48%), Frame = -3 Query: 446 LDKDGLINKDLTSRVMI-FSVGKRRCIGEELSKMQ 479 +D I D I FS G R CIG++ + M+ Sbjct: 595 IDSSQKIASDAIPYAYIPFSAGPRNCIGQKFAMME 491 >scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P608958RE3.T0.seq 757 0 757 ABI Length = 757 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.99, P = 0.63 Identities = 19/64 (29%), Positives = 34/64 (53%), Frame = +1 Query: 460 VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKSFKVN 519 V+ F++G R C+G++L+KM+LF+ ++ L + F E + ++P F V Sbjct: 64 VIPFNIGTRHCLGQQLAKMELFITLTSLCQRFRFTLPLGETPDLTGESTFILRPFPFHVI 243 Query: 520 VTLR 523 T R Sbjct: 244 ATKR 255 >scf/ciona01/G126/seq_dir/hrs/G126P609299F.T0/G126P609299FB12.T0.seq 703 0 703 ABI Length = 703 Minus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.2, P = 0.70 Identities = 15/48 (31%), Positives = 28/48 (58%), Frame = -2 Query: 52 PGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNG 99 P P P+IGN + + H+ + A+ +GD+F+I++G +V+ G Sbjct: 513 PSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKMGCFDTLVVTG 370 >scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P608958RA3.T0.seq 764 0 764 ABI Length = 764 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.3, P = 0.73 Identities = 19/64 (29%), Positives = 33/64 (51%), Frame = +2 Query: 460 VMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPKSFKVN 519 V F++G R C+G++L+KM+LF+ ++ L + F E + ++P F V Sbjct: 74 VFPFNIGTRHCLGQQLAKMELFITLTSLCQRFRFTLPLGETPDLTGESTFILRPFPFHVI 253 Query: 520 VTLR 523 T R Sbjct: 254 ATKR 265 >scf/ciona01/G126/seq_dir/hrs/G126P607987R.T0/G126P607987RG9.T0.seq 716 0 716 ABI Length = 716 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.6, P = 0.93 Identities = 19/62 (30%), Positives = 33/62 (53%), Frame = -3 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYG-DVFQIRLGSCPIVVLNGERAI 103 R+ ++ PPGP P++G +G+ ++LA +Y V R+G ++LN AI Sbjct: 234 RKPKNFPPGPRGLPILGIVPYLGKHPEKVLSKLADKYNPSVMSFRMGRMDWIILNDIEAI 55 Query: 104 HQ 105 +Q Sbjct: 54 NQ 49 >scf/ciona01/G126/seq_dir/hrs/G126P609032F.T0/G126P609032FH11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.7, P = 0.93 Identities = 15/45 (33%), Positives = 27/45 (60%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + DIF A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 259 LKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 125 >scf/ciona01/G126/seq_dir/hrs/G126P608592R.T0/G126P608592RH4.T0.seq 725 0 725 ABI Length = 725 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.7, P = 0.93 Identities = 19/62 (30%), Positives = 33/62 (53%), Frame = +1 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYG-DVFQIRLGSCPIVVLNGERAI 103 R+ ++ PPGP P++G +G+ ++LA +Y V R+G ++LN AI Sbjct: 235 RKPKNFPPGPRGLPILGIVPYLGKHPEKVLSKLADKYNPSVMSFRMGRMDWIILNDIEAI 414 Query: 104 HQ 105 +Q Sbjct: 415 NQ 420 >scf/ciona01/G126/seq_dir/hrs/G126P608855F.T0/G126P608855FD9.T0.seq 722 0 722 ABI Length = 722 Minus Strand HSPs: Score = 81 (28.5 bits), Expect = 5.8, P = 1.00 Identities = 18/54 (33%), Positives = 27/54 (50%), Frame = -2 Query: 101 RAIHQALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRN 154 +AIH+ALV + S + RP F + + + F Y + W R AHS + N Sbjct: 427 KAIHEALVTKASVCSGRPVSPVFDAMVNKQGLFFVDYDDFWTKWRDIAHSGLAN 266 >scf/ciona01/G126/seq_dir/hrs/G126P608045R.T0/G126P608045RH12.T0.seq 706 0 706 ABI Length = 706 Plus Strand HSPs: Score = 79 (27.8 bits), Expect = 9.4, P = 1.00 Identities = 18/66 (27%), Positives = 35/66 (53%), Frame = +2 Query: 434 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDF 493 WP + FDP RFL ++ + + S + FS G R CIG++ + M+ + ++ + + Sbjct: 35 WPVVDRFDPDRFLPEN-CVGRHPYSFIP-FSAGPRNCIGQKFALMEEKVLLTQILRKYSI 208 Query: 494 RANPNE 499 ++ E Sbjct: 209 HSHDEE 226 >scf/ciona01/G126/seq_dir/hrs/G126P608147F.T0/G126P608147FE10.T0.seq 723 0 723 ABI Length = 723 Minus Strand HSPs: Score = 79 (27.8 bits), Expect = 9.6, P = 1.00 Identities = 13/42 (30%), Positives = 28/42 (66%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A +T ++ L+W LL +P++Q +++ E+ +V+G Sbjct: 225 VRDLFIAGTETTTSTLRWSLLCLIHHPEIQEKLRKEILKVLG 100 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.137 0.417 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 543 543 10. 75 3 13 22 0.064 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_22.seq Title: /seqs/databases/ciona/ciona_22.seq Release date: unknown Posted date: 3:07 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 78,616,084 # of sequences in database: 100,000 # of database sequences satisfying E: 38 No. of states in DFA: 545 (58 KB) Total size of DFA: 104 KB (128 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.90u 0.22s 14.12t Elapsed: 00:00:21 Total cpu time: 13.94u 0.23s 14.17t Elapsed: 00:00:22 Start: Mon Apr 1 21:57:02 2002 End: Mon Apr 1 21:57:24 2002