TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 3_CYP1B1_NM_000104 (543 letters) Database: /seqs/databases/ciona/ciona_06.seq 100,000 sequences; 77,316,355 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P65930R.T0/G126P65930... -1 308 1.1e-26 1 scf/ciona01/G126/seq_dir/hrs/G126P67722R.T0/G126P67722... +2 199 7.0e-22 2 scf/ciona01/G126/seq_dir/hrs/G126P67930F.T0/G126P67930... -3 260 1.9e-21 1 scf/ciona01/G126/seq_dir/hrs/G126P68943F.T0/G126P68943... +2 249 3.3e-20 1 scf/ciona01/G126/seq_dir/hrs/G126P66004F.T0/G126P66004... +2 204 2.5e-15 1 scf/ciona01/G126/seq_dir/hrs/G126P68803R.T0/G126P68803... +1 197 1.4e-14 1 scf/ciona01/G126/seq_dir/hrs/G126P68027R.T0/G126P68027... +1 195 2.3e-14 1 scf/ciona01/G126/seq_dir/hrs/G126P69675F.T0/G126P69675... +3 128 1.1e-09 2 scf/ciona01/G126/seq_dir/hrs/G126P64074R.T0/G126P64074... +1 138 1.5e-08 2 scf/ciona01/G126/seq_dir/hrs/G126P65983R.T0/G126P65983... -2 156 1.6e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P64074F.T0/G126P64074... -3 147 5.1e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P68803R.T0/G126P68803... -3 103 2.1e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P64559R.T0/G126P64559... +2 144 2.8e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P66274R.T0/G126P66274... +1 137 2.5e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P67206F.T0/G126P67206... -2 130 1.3e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P68275R.T0/G126P68275... -3 122 0.00010 1 scf/ciona01/G126/seq_dir/hrs/G126P68390R.T0/G126P68390... -3 84 0.00012 2 scf/ciona01/G126/seq_dir/hrs/G126P67838F.T0/G126P67838... -3 91 0.00037 2 scf/ciona01/G126/seq_dir/hrs/G126P68326R.T0/G126P68326... -1 83 0.00039 2 scf/ciona01/G126/seq_dir/hrs/G126P67788F.T0/G126P67788... +3 113 0.0015 1 scf/ciona01/G126/seq_dir/hrs/G126P69307F.T0/G126P69307... +3 112 0.0028 1 scf/ciona01/G126/seq_dir/hrs/G126P66254R.T0/G126P66254... +2 110 0.0031 1 scf/ciona01/G126/seq_dir/hrs/G126P65761F.T0/G126P65761... -1 110 0.0032 1 scf/ciona01/G126/seq_dir/hrs/G126P68046F.T0/G126P68046... -1 106 0.0092 1 scf/ciona01/G126/seq_dir/hrs/G126P67177R.T0/G126P67177... +1 104 0.015 1 scf/ciona01/G126/seq_dir/hrs/G126P64217F.T1/G126P64217... +1 102 0.024 1 scf/ciona01/G126/seq_dir/hrs/G126P64223R.T0/G126P64223... +1 98 0.062 1 scf/ciona01/G126/seq_dir/hrs/G126P65797F.T0/G126P65797... -1 95 0.13 1 scf/ciona01/G126/seq_dir/hrs/G126P69487F.T0/G126P69487... -2 94 0.18 1 scf/ciona01/G126/seq_dir/hrs/G126P69202R.T0/G126P69202... -2 93 0.22 1 scf/ciona01/G126/seq_dir/hrs/G126P66603R.T0/G126P66603... -1 90 0.42 1 scf/ciona01/G126/seq_dir/hrs/G126P64867F.T0/G126P64867... +3 89 0.53 1 scf/ciona01/G126/seq_dir/hrs/G126P600961F.T0/G126P6009... +2 87 0.69 1 scf/ciona01/G126/seq_dir/hrs/G126P68472R.T0/G126P68472... -3 86 0.78 1 scf/ciona01/G126/seq_dir/hrs/G126P65321R.T0/G126P65321... -3 85 0.87 1 scf/ciona01/G126/seq_dir/hrs/G126P67992R.T0/G126P67992... +1 83 0.97 1 scf/ciona01/G126/seq_dir/hrs/G126P64299F.T0/G126P64299... +1 83 0.97 1 scf/ciona01/G126/seq_dir/hrs/G126P64218F.T0/G126P64218... +1 66 0.98 2 scf/ciona01/G126/seq_dir/hrs/G126P64103R.T0/G126P64103... -3 83 0.98 1 scf/ciona01/G126/seq_dir/hrs/G126P67180F.T0/G126P67180... +1 82 0.99 1 scf/ciona01/G126/seq_dir/hrs/G126P67883R.T0/G126P67883... +1 82 0.99 1 scf/ciona01/G126/seq_dir/hrs/G126P67883F.T0/G126P67883... -2 82 0.990 1 scf/ciona01/G126/seq_dir/hrs/G126P68445F.T0/G126P68445... -2 80 0.9993 1 >scf/ciona01/G126/seq_dir/hrs/G126P65930R.T0/G126P65930RA6.T0.seq 703 0 703 ABI Length = 703 Minus Strand HSPs: Score = 308 (108.4 bits), Expect = 1.1e-26, P = 1.1e-26 Identities = 66/174 (37%), Positives = 102/174 (58%), Frame = -1 Query: 350 PDVQTRVQAELDQ-VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTS 408 PD+ +++AE+D V GR +L D NLPY A + E R+ V T+A + Sbjct: 694 PDIAKKLKAEIDNNVTGRVKLD---DMINLPYTQAVIQEVFRYRPVVNFGTMRKTSAVGT 524 Query: 409 VLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKR 468 GY IPK T+V N WSV+HDPV+W NPE F P R LD++G K + V+ F+VG+R Sbjct: 523 ATGYRIPKGTIVMPNIWSVHHDPVRWKNPEVFRPERHLDENGKFKK--SDAVIPFNVGQR 350 Query: 469 RCIGEELSKMQLFLFISILAHQCDFRAN-PNEPAKMNFSYGLTIKPKSFKVNVTLR 523 C+G +L++ ++F+F+ + + DF+ P E MN ++ P +KV++ +R Sbjct: 349 SCLGRQLAQTEIFIFLVRMMQKFDFKIETPLEDLDMNGNHVFIHYPPDYKVSIQVR 182 >scf/ciona01/G126/seq_dir/hrs/G126P67722R.T0/G126P67722RF2.T0.seq 714 0 714 ABI Length = 714 Plus Strand HSPs: Score = 199 (70.1 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22 Identities = 37/81 (45%), Positives = 52/81 (64%), Frame = +2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 V+ N W ++DPV WPNP FDP R +DK G N ++ VM FSVG R CIGE+L+K + Sbjct: 323 VYSNIWGAHNDPVVWPNPSKFDPYRHIDKAG--NFISSNNVMPFSVGNRNCIGEQLAKQE 496 Query: 480 LFLFISILAHQCDFRANPNEP 500 +F+FI+ + + + P EP Sbjct: 497 IFIFITKILQKFELSVPPGEP 559 Score = 90 (31.7 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22 Identities = 17/47 (36%), Positives = 25/47 (53%), Frame = +3 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVV 420 D +P+ A + E MR+ + P I H T+ + GY IPK T+V Sbjct: 30 DSKKMPFTCAVIQETMRYRTVTPYGIQHCVTSTVELGGYIIPKGTLV 170 >scf/ciona01/G126/seq_dir/hrs/G126P67930F.T0/G126P67930FC2.T0.seq 768 0 768 ABI Length = 768 Minus Strand HSPs: Score = 260 (91.5 bits), Expect = 1.9e-21, P = 1.9e-21 Identities = 52/165 (31%), Positives = 94/165 (56%), Frame = -3 Query: 336 STALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFV 395 ST L + L + P++Q ++ AE+ +V G D + + ++PY A +YE+ R Sbjct: 631 STGLSYFSL---KTPEIQNKMAAEIIKVTGNDIIN-VSMMESMPYTRAVMYESTRMRPVF 464 Query: 396 PVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKD 455 P+++ H T++ +V IPK T+V N W++ +DP W NPE+F P R + ++G K+ Sbjct: 463 PLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPERHITENGGFTKN 284 Query: 456 LTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP 500 +++ FS+G R C+G +++ F+F++ L FR + N+P Sbjct: 283 --EKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFKFRFHENQP 155 >scf/ciona01/G126/seq_dir/hrs/G126P68943F.T0/G126P68943FC2.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 249 (87.7 bits), Expect = 3.3e-20, P = 3.3e-20 Identities = 51/137 (37%), Positives = 79/137 (57%), Frame = +2 Query: 382 LAFL--YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPEN 439 L FL E R VP+++PH ++ +TS++GY IPK T+V N W ++HD W NP Sbjct: 104 LIFLPFQEINRMRPNVPLSVPHYSSTDTSIMGYRIPKATIVLTNIWGIHHDEKIWKNPYE 283 Query: 440 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNE 499 F+P R LD G K + +V+ F++G R C+G++L+ M+ FL L H+ P E Sbjct: 284 FNPERHLDVHGNFVK--SKKVIHFNIGLRSCLGQQLANMEQFLVTVSLFHRFSISLKPGE 457 Query: 500 PAKMNFSYGLTIKPKSFKV 518 A M ++++P S+ V Sbjct: 458 KADMAGESVVSLRPYSYNV 514 >scf/ciona01/G126/seq_dir/hrs/G126P66004F.T0/G126P66004FF11.T0.seq 712 0 712 ABI Length = 712 Plus Strand HSPs: Score = 204 (71.8 bits), Expect = 2.5e-15, P = 2.5e-15 Identities = 47/142 (33%), Positives = 80/142 (56%), Frame = +2 Query: 79 RRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASFRVVSGGRSMAFGHYS 138 RRYG ++ I+LG+ +++LN I +AL++Q F+ RP F SF+ +S GR + F Sbjct: 80 RRYGPIYLIKLGTADVLILNNYDVIKEALIRQRGVFSGRPVFESFKKISQGRGIVFNSSL 259 Query: 139 EHWKVQRRAAHSMMRNF--FTRQPRSRQVLEGHVLSEARELVALL---VRGSADGAFLDP 193 +R +++++ F P+++ + GHV E +LV +L R S + A ++P Sbjct: 260 TQGAAWQRMKMTIVKHLHRFIASPQTKGFVAGHVQKETVQLVHILSEKCRSSPNQA-IEP 436 Query: 194 RPLTVVAVANVMSAVCFGCRYSH 216 +AVANV+ ++ FG RY H Sbjct: 437 VENINLAVANVVCSIMFGHRYQH 505 >scf/ciona01/G126/seq_dir/hrs/G126P68803R.T0/G126P68803RF4.T0.seq 733 0 733 ABI Length = 733 Plus Strand HSPs: Score = 197 (69.3 bits), Expect = 1.4e-14, P = 1.4e-14 Identities = 42/103 (40%), Positives = 62/103 (60%), Frame = +1 Query: 417 DTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELS 476 D +FVN W+V+++P W P F P R LD G N + V+ FSVG R C+GE+L+ Sbjct: 256 DWQIFVNLWAVHNNPDVWDEPSKFKPERHLDDKG--NFVQSKHVIPFSVGPRHCLGEQLA 429 Query: 477 KMQLFLFISILAHQCDFRANPNE---PAKMNFSYGLTIKPKSFKV 518 +M++F+F+ L + +F +P+E P N SYG PK FK+ Sbjct: 430 RMEVFIFLVSLVQKFEFLPDPDEVNLPDIENGSYGPLCAPKPFKM 564 >scf/ciona01/G126/seq_dir/hrs/G126P68027R.T0/G126P68027RA1.T0.seq 744 0 744 ABI Length = 744 Plus Strand HSPs: Score = 195 (68.6 bits), Expect = 2.3e-14, P = 2.3e-14 Identities = 38/99 (38%), Positives = 57/99 (57%), Frame = +1 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQ 479 VF N W V++DPV WPNP FDP R +D G +S+V+ FS+G R C+GE L+ + Sbjct: 295 VFPNLWGVHNDPVTWPNPSQFDPYRHIDDKGKYRN--SSKVIPFSIGPRSCLGEVLAMQE 468 Query: 480 LFLFISILAHQCDFRANPNEPAKMNFSYG-LTIKPKSFKV 518 +F+F++ + + + P EP LT P +FK+ Sbjct: 469 MFVFLTAILQKYEINPVPGEPLPSVVGINSLTCTPANFKL 588 >scf/ciona01/G126/seq_dir/hrs/G126P69675F.T0/G126P69675FE11.T0.seq 714 0 714 ABI Length = 714 Plus Strand HSPs: Score = 128 (45.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09 Identities = 28/80 (35%), Positives = 49/80 (61%), Frame = +3 Query: 418 TVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELS 476 T V N + DP W NP FD R ++KDG K + S+ +I F +G R CIGE+L+ Sbjct: 480 T*VLPNIHGCHSDPNIWKNPSKFDIYRHINKDG---KFVPSKKVIPFGIGARACIGEKLA 650 Query: 477 KMQLFLFISILAHQCDFRANP 497 +++ ++F++ +A + + ++P Sbjct: 651 RIETYVFLTNIAKRFEILSDP 713 Score = 80 (28.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09 Identities = 19/60 (31%), Positives = 28/60 (46%), Frame = +2 Query: 370 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNH 429 P + LP + AF+ E RF + + + H TT + + G+ IPK T V S H Sbjct: 275 PVLTTVKKLPLLEAFIQEIFRFKTLILLGGQHLTTKDVEINGHFIPKSTKVVKGMSSEPH 454 >scf/ciona01/G126/seq_dir/hrs/G126P64074R.T0/G126P64074RG12.T0.seq 741 0 741 ABI Length = 741 Plus Strand HSPs: Score = 138 (48.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08 Identities = 26/69 (37%), Positives = 43/69 (62%), Frame = +1 Query: 39 LLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLN 98 L+ RR+ + PPGPFAWP++GN ++ + + + R YGDV+ + GS +VV+N Sbjct: 70 LIYLHRRKRDNLPPGPFAWPVLGNLLSLRSNSTAALKEIRRTYGDVYSLYFGSRLVVVVN 249 Query: 99 GERAIHQAL 107 G +A+ + L Sbjct: 250 G-KAVEECL 273 Score = 58 (20.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08 Identities = 16/59 (27%), Positives = 29/59 (49%), Frame = +3 Query: 114 FADRPAFASFRVVSGGRSMAFGHYS-EHWKVQRRAAHSMMRNFF-TRQPRSRQVLEGHV 170 F+ RP + + V GG+S AF H E + R+ A +++ + RS+ +G + Sbjct: 549 FSMRPELFTAQYVLGGKSFAFSHMDVETHRRYRKLAVGVVKELLVSTHERSQPTTKGEI 725 >scf/ciona01/G126/seq_dir/hrs/G126P65983R.T0/G126P65983RB8.T0.seq 777 0 777 ABI Length = 777 Minus Strand HSPs: Score = 156 (54.9 bits), Expect = 1.6e-08, P = 1.6e-08 Identities = 35/112 (31%), Positives = 62/112 (55%), Frame = -2 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAF--GHYSEHWKVQRRAAHSMMRNFFTRQPRSRQ 164 +++Q F+ RP F S++ VS G S+ F G WK + + + F T R+++ Sbjct: 746 VIKQREVFSGRPKFESYKAVSAGESVVFTTGESLAPWKSHKFKSXRHLHKFAT-SVRTKE 570 Query: 165 VLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDD 218 + + +E ++ L R S DG F+DP + + +ANVM AVC+G R+ +++ Sbjct: 569 KVNNIITTECMLMLQCLHRRSQDG-FVDPEDVIRMTIANVMCAVCYGNRFEYEN 411 >scf/ciona01/G126/seq_dir/hrs/G126P64074F.T0/G126P64074FG12.T0.seq 641 0 641 ABI Length = 641 Minus Strand HSPs: Score = 147 (51.7 bits), Expect = 5.1e-08, P = 5.1e-08 Identities = 27/61 (44%), Positives = 38/61 (62%), Frame = -3 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVK 433 D+ LP+V+A + E R SFVP +PHA +T++ GY IP TV+ ++ SVNHD Sbjct: 249 DRSQLPFVMALITEVSRHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVNHDHTL 70 Query: 434 W 434 W Sbjct: 69 W 67 >scf/ciona01/G126/seq_dir/hrs/G126P68803R.T0/G126P68803RD1.T0.seq 705 0 705 ABI Length = 705 Minus Strand HSPs: Score = 103 (36.3 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07 Identities = 19/48 (39%), Positives = 27/48 (56%), Frame = -3 Query: 369 LPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPK 416 +P M Q +PY+ AF+ E RF + + IPH T + + GY IPK Sbjct: 175 VPNMSHQEKMPYLRAFIQEVHRFQTIAGLNIPHCVTEDCILYGYRIPK 32 Score = 87 (30.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07 Identities = 14/43 (32%), Positives = 26/43 (60%), Frame = -1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 I D+F DT + AL W ++ +P+ Q ++ E+DQ++G+ Sbjct: 504 IRDLFVGGIDTTTAALGWGIVCLLNFPECQDKIHQEIDQIIGK 376 >scf/ciona01/G126/seq_dir/hrs/G126P64559R.T0/G126P64559RC8.T0.seq 702 0 702 ABI Length = 702 Plus Strand HSPs: Score = 144 (50.7 bits), Expect = 2.8e-07, P = 2.8e-07 Identities = 35/107 (32%), Positives = 60/107 (56%), Frame = +2 Query: 420 VFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMI-FSVGKRRCIGEELSKM 478 +F N +V+ D W +P FD R +DK+G K + S+ +I F +G R CIGE+L++ Sbjct: 119 IFTNLHAVHSDSKTWEDPYKFDIYRHIDKNG---KFVASKKVIPFGIGARSCIGEKLAQT 289 Query: 479 QLFLFISILAHQCDFR--ANPNEPAKMNFSY-GLTIKPKSFKVNVTLRES 525 +++LF++ + + + + P +N G P SFKV + +R S Sbjct: 290 EIYLFLANIIKRFEILPDSGSKHPPPLNDGVTGFAFTPFSFKVVLKIRNS 439 >scf/ciona01/G126/seq_dir/hrs/G126P66274R.T0/G126P66274RE5.T0.seq 744 0 744 ABI Length = 744 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 2.5e-06, P = 2.5e-06 Identities = 26/78 (33%), Positives = 43/78 (55%), Frame = +1 Query: 318 ENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPN 377 E + + D+F A DT ST + W +L +PDVQ R+ E+D ++G + P + + Sbjct: 133 EQLVPLVRDLFMAGTDTSSTTITWAILFLASFPDVQGRIHEEIDTIIGYHQRPSISFEDK 312 Query: 378 LPYVLAFLYEAMRFSSFV 395 +PYV A L + F ++V Sbjct: 313 MPYVRAVLQVNVIFVNYV 366 >scf/ciona01/G126/seq_dir/hrs/G126P67206F.T0/G126P67206FA1.T0.seq 682 0 682 ABI Length = 682 Minus Strand HSPs: Score = 130 (45.8 bits), Expect = 1.3e-05, P = 1.3e-05 Identities = 24/55 (43%), Positives = 36/55 (65%), Frame = -2 Query: 374 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVN 428 D+ LP+V+A ++E R SFVP +PHA +T++ GY IP TV+ ++ SVN Sbjct: 207 DRSQLPFVMALIWEVARHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVN 43 >scf/ciona01/G126/seq_dir/hrs/G126P68275R.T0/G126P68275RC12.T0.seq 663 0 663 ABI Length = 663 Minus Strand HSPs: Score = 122 (42.9 bits), Expect = 0.00010, P = 0.00010 Identities = 35/86 (40%), Positives = 51/86 (59%), Frame = -3 Query: 438 ENFDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFIS-ILAHQCDFRAN 496 + F P R LD DG ++RV+ FSVG R C+G +L+K +LFLF + +L H +F+ + Sbjct: 661 QXFRPERHLDGDGKFIP--SNRVIPFSVGHRSCLGVQLAKAELFLFYAGVLKHH-EFQVD 491 Query: 497 PNEPAK-MNFSYGLTIK-PKSFKVNVTLR 523 PN + G T+K PK F V + R Sbjct: 490 PNFGLPDWSRDDGGTLKTPKEFTVCIKER 404 >scf/ciona01/G126/seq_dir/hrs/G126P68390R.T0/G126P68390RD12.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 18/61 (29%), Positives = 31/61 (50%), Frame = -3 Query: 360 LDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTV 419 L+++ + P + +P+ A + E MR+ + P I H T+ + GY IPK T+ Sbjct: 432 LNKLFAGTKEPNSRHKVKMPFTCAVIQETMRYRTVTPYGIQHCVTSPVELDGYIIPKGTL 253 Query: 420 V 420 V Sbjct: 252 V 250 Score = 82 (28.9 bits), Expect = 0.00012, Sum P(2) = 0.00012 Identities = 12/23 (52%), Positives = 16/23 (69%), Frame = -3 Query: 420 VFVNQWSVNHDPVKWPNPENFDP 442 V+ N W ++DPV WPNP F+P Sbjct: 93 VYSNIWGAHNDPVVWPNPSKFEP 25 >scf/ciona01/G126/seq_dir/hrs/G126P67838F.T0/G126P67838FA11.T0.seq 717 0 717 ABI Length = 717 Minus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 13/41 (31%), Positives = 26/41 (63%), Frame = -3 Query: 363 VVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHAT 403 + G +++P + ++ N+PY AF+ E R+ + VP+ + H T Sbjct: 184 ITGHEKIPAVENKSNMPYTCAFMQEVYRYRTLVPLNLTHMT 62 Score = 69 (24.3 bits), Expect = 0.00037, Sum P(2) = 0.00037 Identities = 12/42 (28%), Positives = 24/42 (57%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 + D+F A +T + L+W L +P Q +++ E+ +V+G Sbjct: 377 VRDLFFAGTETTMSTLRWAXLCLIHHPKTQQKLREEIFKVLG 252 >scf/ciona01/G126/seq_dir/hrs/G126P68326R.T0/G126P68326RC1.T0.seq 731 0 731 ABI Length = 731 Minus Strand HSPs: Score = 83 (29.2 bits), Expect = 0.00039, Sum P(2) = 0.00039 Identities = 17/61 (27%), Positives = 32/61 (52%), Frame = -1 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 104 R+ +++PPGP P++G +G + + +++YG V +R+G V+L I Sbjct: 545 RRPKNSPPGPRGIPVLGVLPFMGLYPERTLNKWSKKYGPVMSVRMGRHDWVILGDHATIQ 366 Query: 105 Q 105 Q Sbjct: 365 Q 363 Score = 78 (27.5 bits), Expect = 0.00039, Sum P(2) = 0.00039 Identities = 16/41 (39%), Positives = 23/41 (56%), Frame = -1 Query: 106 ALVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQRR 146 ALV+Q + F RP + ++ GR +AF Y WK QR+ Sbjct: 242 ALVKQSNVFFGRPHVPTLHHITQGRGLAFVDYGPVWKSQRK 120 >scf/ciona01/G126/seq_dir/hrs/G126P67788F.T0/G126P67788FG1.T0.seq 757 0 757 ABI Length = 757 Plus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0015, P = 0.0015 Identities = 20/50 (40%), Positives = 27/50 (54%), Frame = +3 Query: 401 HATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDG 450 H + + V GY IPK T + S++ DP W NP FDP FL+ +G Sbjct: 558 HCSEEDQKVAGYEIPKGTSIMPCYHSIHFDPKFWKNPNQFDPTNFLENEG 707 >scf/ciona01/G126/seq_dir/hrs/G126P69307F.T0/G126P69307FF5.T0.seq 1066 0 1066 ABI Length = 1066 Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.0028, P = 0.0028 Identities = 25/72 (34%), Positives = 36/72 (50%), Frame = +3 Query: 365 GRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQ 424 G LP + + NLP + AF+ E RF + P++I H T+ + + GY IP D V+ Sbjct: 483 GEHVLPSVDHKDNLPLLRAFIQEVYRFQTIKPLSIKHRTSEDVEIGGYFIP*DPTVWGLP 662 Query: 425 WS-VNHDPVKWP 435 W V WP Sbjct: 663 WD*VPRFSFYWP 698 >scf/ciona01/G126/seq_dir/hrs/G126P66254R.T0/G126P66254RB5.T0.seq 734 0 734 ABI Length = 734 Plus Strand HSPs: Score = 110 (38.7 bits), Expect = 0.0031, P = 0.0031 Identities = 38/110 (34%), Positives = 53/110 (48%), Frame = +2 Query: 21 TTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARR 80 T++LL L V+ V + R R + PPG PL+G G S A R Sbjct: 275 TSVLLFLLVVVLVFLWNR------RGSGNFPPGFDGVPLLGCIPLFGVHRERSIAEWGRE 436 Query: 81 YG-DVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADR--PAFASFRVVSGGR 130 G +F I+LG +VVLN +I +A V++G F +R P F R GG+ Sbjct: 437 KGWPIFYIKLGITKVVVLNTFESIEEAFVKKGQYFVERHIPIFLK-RYSKGGK 592 >scf/ciona01/G126/seq_dir/hrs/G126P65761F.T0/G126P65761FA2.T0.seq 744 0 744 ABI Length = 744 Minus Strand HSPs: Score = 110 (38.7 bits), Expect = 0.0032, P = 0.0032 Identities = 26/74 (35%), Positives = 37/74 (50%), Frame = -1 Query: 347 TRYPDVQTRVQAELDQVVGRDRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTAN 406 T +P + A+ D GRD + + NLPY A L E R + P+ IP T + Sbjct: 402 TLHPITLSTTYADCDYFKGRDGKLSL--KTNLPYTKAVLQETYRIRTVTPLAIPRRTRGD 229 Query: 407 TSVLGYHIPKDTVV 420 +++GY IPK T V Sbjct: 228 VNLMGYFIPKHTEV 187 >scf/ciona01/G126/seq_dir/hrs/G126P68046F.T0/G126P68046FA4.T0.seq 755 0 755 ABI Length = 755 Minus Strand HSPs: Score = 106 (37.3 bits), Expect = 0.0092, P = 0.0092 Identities = 29/82 (35%), Positives = 43/82 (52%), Frame = -1 Query: 446 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNF 505 LD DG N V+ FSVG R C+GE+L++M++F+F+ L + +F +P N Sbjct: 698 LDTDG--NFVQLKHVIPFSVGPRHCLGEQLARMEVFIFLVSLVQKFEFLPDPKATVLYNL 525 Query: 506 SYGLTIK---PKSFKV--NVTLRE 524 G + P FK+ V RE Sbjct: 524 ENGTSGAVHVPLPFKIVAKVVQRE 453 >scf/ciona01/G126/seq_dir/hrs/G126P67177R.T0/G126P67177RG5.T0.seq 755 0 755 ABI Length = 755 Plus Strand HSPs: Score = 104 (36.6 bits), Expect = 0.016, P = 0.015 Identities = 23/59 (38%), Positives = 37/59 (62%), Frame = +1 Query: 440 FDPARFLDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPN 498 F P R LD G N ++ V+ FSVG R C+GE+L++M++F+F+ L + F +P+ Sbjct: 37 FKPERHLDDKG--NFVQSNHVIPFSVGPRHCLGEQLARMKVFIFLVSLV*KFKFLPDPD 207 >scf/ciona01/G126/seq_dir/hrs/G126P64217F.T1/G126P64217FG3.T1.seq 724 0 724 ABI Length = 724 Plus Strand HSPs: Score = 102 (35.9 bits), Expect = 0.025, P = 0.024 Identities = 41/137 (29%), Positives = 57/137 (41%), Frame = +1 Query: 394 FVPVT-IPHATT-----ANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARFLD 447 F P T I H T N L H V +N W +++D W P F R LD Sbjct: 274 FCPATNITHLTL*GICYLNDDSLTIHF--SLKVSLNAWGLHNDKKIWETPPLFIRDRHLD 447 Query: 448 KDGLINKDLTSRVMI-FSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEP------ 500 DG ++S+ ++ G R C+GE S+ QLFL D + N Sbjct: 448 PDGNF---MSSKYLLPVGAGVRSCLGEN*SRAQLFLVYHATYQHYDLSVDENNRRLWTNV 618 Query: 501 AKMNFSYGLTIKPKSFKVNVTL 522 ++S+ I S + NVTL Sbjct: 619 GAASYSHHTRITS*SIRDNVTL 684 >scf/ciona01/G126/seq_dir/hrs/G126P64223R.T0/G126P64223RH11.T0.seq 678 0 678 ABI Length = 678 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.065, P = 0.062 Identities = 20/63 (31%), Positives = 37/63 (58%), Frame = +1 Query: 156 FTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYS 215 F R+++ + + +E ++ L R S DG F+DP + + +ANVM AVC+G R+ Sbjct: 112 FATSVRTKEKVNNIITTECMLMLQCLHRRSQDG-FVDPEDVIRMTIANVMCAVCYGNRFE 288 Query: 216 HDD 218 +++ Sbjct: 289 YEN 297 >scf/ciona01/G126/seq_dir/hrs/G126P65797F.T0/G126P65797FG10.T0.seq 664 0 664 ABI Length = 664 Minus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.14, P = 0.13 Identities = 37/116 (31%), Positives = 53/116 (45%), Frame = -1 Query: 14 NPLSIQQTTLLLLLSVLATVHVGQRLLRQRRRQLRSAPPGPFAWPLIGNAAAVGQAAHLS 73 N L + T +LL L V+ V + R R + PPG L+G G S Sbjct: 544 NILGMDFTYVLLFLRVVVVVFLWNR------RGSGNFPPGLDGVRLLGCIPIFGAHRERS 383 Query: 74 FARLARRYG-DVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPAFASF-RVVSGG 129 A R G +F I++G +VVLN +I +A V++G+ F SF R+ GG Sbjct: 382 IAEWGREKGWPIFYIKVGIKKVVVLNTFESIEEAFVKKGAMFCGE*YSVSFPRIR*GG 209 >scf/ciona01/G126/seq_dir/hrs/G126P69487F.T0/G126P69487FH10.T0.seq 717 0 717 ABI Length = 717 Minus Strand HSPs: Score = 94 (33.1 bits), Expect = 0.19, P = 0.18 Identities = 15/44 (34%), Positives = 31/44 (70%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRD 367 + D+F A+ DT S+ + W++L + DVQ ++Q E+D+++G++ Sbjct: 443 VRDLFMAATDTTSSTICWIILFLCKNTDVQIKMQEEIDELLGQN 312 >scf/ciona01/G126/seq_dir/hrs/G126P69202R.T0/G126P69202RC7.T0.seq 712 0 712 ABI Length = 712 Minus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.25, P = 0.22 Identities = 21/78 (26%), Positives = 38/78 (48%), Frame = -2 Query: 386 YEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPVKWPNPENFDPARF 445 Y+ +R P ++ ++ + + +P+ V N W V++DP W +P F+P R Sbjct: 222 YQPIRLIRTTP*SMKDEVSSTLKGISF-VPQ---VLTNIWRVHNDPRVWKDPHKFNPGRH 55 Query: 446 LDKDGLINKDLTSRVMIF 463 LD +G +N +IF Sbjct: 54 LDSNGELNPTKGVLXLIF 1 >scf/ciona01/G126/seq_dir/hrs/G126P66603R.T0/G126P66603RG3.T0.seq 713 0 713 ABI Length = 713 Minus Strand HSPs: Score = 90 (31.7 bits), Expect = 0.55, P = 0.42 Identities = 16/38 (42%), Positives = 26/38 (68%), Frame = -1 Query: 107 LVQQGSAFADRPAFASFRVVSGGRSMAFGHYSEHWKVQ 144 LV+QG+AF+ RP+ A+ ++ G + F Y++HWK Q Sbjct: 206 LVKQGNAFSGRPSIATIDQITEGHGVLFIDYNDHWKRQ 93 >scf/ciona01/G126/seq_dir/hrs/G126P64867F.T0/G126P64867FC6.T0.seq 771 0 771 ABI Length = 771 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.77, P = 0.53 Identities = 14/40 (35%), Positives = 24/40 (60%), Frame = +3 Query: 326 DIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVG 365 D+F A +T + + W+LL YPD+Q ++ E+ V+G Sbjct: 561 DLFNAGTETSTNVILWMLLALMHYPDIQEKLYQEIHDVIG 680 >scf/ciona01/G126/seq_dir/hrs/G126P600961F.T0/G126P600961FH4.T0.seq 701 0 701 ABI Length = 701 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.2, P = 0.69 Identities = 19/50 (38%), Positives = 28/50 (56%), Frame = +2 Query: 417 DTVVFVNQWSVNHDPVKWPNPENFDPARFLDKDGLINKDLTSRVMIFSVG 466 D ++VN W+V+++P W P F P R LD G N ++ + FSVG Sbjct: 554 DWQIYVNLWAVHNNPNVWDEPNKFKPERHLDDKG--NFVQSNHWIPFSVG 697 >scf/ciona01/G126/seq_dir/hrs/G126P68472R.T0/G126P68472RA10.T0.seq 709 0 709 ABI Length = 709 Minus Strand HSPs: Score = 86 (30.3 bits), Expect = 1.5, P = 0.78 Identities = 15/47 (31%), Positives = 28/47 (59%), Frame = -3 Query: 323 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 369 +I+D+F A +T +T L W ++ +PD+Q + EL Q +G + + Sbjct: 443 SISDLFIAGTETTTTTLLWCMIAMLHFPDIQALIYNELMQEIGSNMI 303 >scf/ciona01/G126/seq_dir/hrs/G126P65321R.T0/G126P65321RD11.T0.seq 721 0 721 ABI Length = 721 Minus Strand HSPs: Score = 85 (29.9 bits), Expect = 2.0, P = 0.87 Identities = 14/45 (31%), Positives = 27/45 (60%), Frame = -3 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR 368 + D+F A +T ++ + W L R+P++Q +V E+D +G+ R Sbjct: 275 LKDLFAAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKAR 141 >scf/ciona01/G126/seq_dir/hrs/G126P67992R.T0/G126P67992RE7.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.4, P = 0.97 Identities = 19/56 (33%), Positives = 29/56 (51%), Frame = +1 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAIHQ 105 PPG P++G G+ + A+ +R +YG V +R G VVLN +IH+ Sbjct: 163 PPGVRGIPILGATPFFGRYPQETIAKWSREKYGPVMSVRFGQQDAVVLNDYESIHE 330 >scf/ciona01/G126/seq_dir/hrs/G126P64299F.T0/G126P64299FD4.T0.seq 749 0 749 ABI Length = 749 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.5, P = 0.97 Identities = 19/56 (33%), Positives = 29/56 (51%), Frame = +1 Query: 51 PPGPFAWPLIGNAAAVGQAAHLSFARLAR-RYGDVFQIRLGSCPIVVLNGERAIHQ 105 PPG P++G G+ + A+ +R +YG V +R G VVLN +IH+ Sbjct: 247 PPGVRGIPILGATPFFGRYPQETIAKWSREKYGPVMSVRFGQQDAVVLNDYESIHE 414 >scf/ciona01/G126/seq_dir/hrs/G126P64218F.T0/G126P64218FG1.T0.seq 943 0 943 ABI Length = 943 Plus Strand HSPs: Score = 66 (23.2 bits), Expect = 3.9, Sum P(2) = 0.98 Identities = 11/34 (32%), Positives = 20/34 (58%), Frame = +1 Query: 434 WPNPENFDPARFLDKDGLINKDLTSRVMIFSVGK 467 +P P+ F+P R++++ G K+L F +GK Sbjct: 61 FPEPDKFNPDRWINEKGGFRKELLQHFFPFGIGK 162 Score = 59 (20.8 bits), Expect = 3.9, Sum P(2) = 0.98 Identities = 11/25 (44%), Positives = 17/25 (68%), Frame = +1 Query: 466 GKRRCIGEELSKMQLFLFIS-ILAH 489 GKR C GE L++ LF+ ++ +L H Sbjct: 226 GKRSCAGESLARANLFIVVATLLQH 300 >scf/ciona01/G126/seq_dir/hrs/G126P64103R.T0/G126P64103RE3.T0.seq 921 0 921 ABI Length = 921 Minus Strand HSPs: Score = 83 (29.2 bits), Expect = 4.0, P = 0.98 Identities = 18/61 (29%), Positives = 30/61 (49%), Frame = -3 Query: 45 RQLRSAPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 104 R+ ++ PPGP P +G +G A + + +++YG V +R+G V L I Sbjct: 262 RRPKNYPPGPRGIPFLGVLPFLGNYAERTMHKWSKKYGPVMSVRMGRQDWVFLGDHETIR 83 Query: 105 Q 105 Q Sbjct: 82 Q 80 >scf/ciona01/G126/seq_dir/hrs/G126P67180F.T0/G126P67180FH1.T0.seq 718 0 718 ABI Length = 718 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.3, P = 0.99 Identities = 14/46 (30%), Positives = 27/46 (58%), Frame = +1 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 369 + D+F A +T ++ +W LL YP+ Q +++ E V+G+ +L Sbjct: 349 LRDLFEAGSETTTSTTRWALLCMLHYPETQDKLREETMNVIGK*KL 486 >scf/ciona01/G126/seq_dir/hrs/G126P67883R.T0/G126P67883RF1.T0.seq 768 0 768 ABI Length = 768 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.6, P = 0.99 Identities = 14/44 (31%), Positives = 25/44 (56%), Frame = +1 Query: 323 TITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 T D+F A +T ++ +W LL YP+ Q ++ E+ V+G+ Sbjct: 634 TXRDLFEAGSETTTSTTRWALLCMLHYPETQEXLREEIMNVIGK 765 >scf/ciona01/G126/seq_dir/hrs/G126P67883F.T0/G126P67883FF1.T0.seq 772 0 772 ABI Length = 772 Minus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.6, P = 0.99 Identities = 13/43 (30%), Positives = 26/43 (60%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 + ++F A +T + W +L RYPD Q++++ E+ V+G+ Sbjct: 414 VRELFEAGTETTVGTMLWAVLCLVRYPDAQSKLRKEIFDVIGK 286 >scf/ciona01/G126/seq_dir/hrs/G126P68445F.T0/G126P68445FF11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 80 (28.2 bits), Expect = 7.3, P = 1.00 Identities = 14/43 (32%), Positives = 27/43 (62%), Frame = -2 Query: 324 ITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 366 + D+F A +T ++ L+W LL +P Q R++ E+ +V+G+ Sbjct: 214 VRDLFFAGSETSTSTLRWTLLCLIHHPKKQERLRKEIFEVLGK 86 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.137 0.417 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 543 543 10. 74 3 13 22 0.064 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_06.seq Title: /seqs/databases/ciona/ciona_06.seq Release date: unknown Posted date: 3:02 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 77,316,355 # of sequences in database: 100,000 # of database sequences satisfying E: 43 No. of states in DFA: 545 (58 KB) Total size of DFA: 104 KB (128 KB) Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.09u 0.11s 13.20t Elapsed: 00:00:20 Total cpu time: 13.13u 0.15s 13.28t Elapsed: 00:00:20 Start: Mon Apr 1 21:51:37 2002 End: Mon Apr 1 21:51:57 2002