TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 1_CYP1A1_NM_000499 (512 letters) Database: /seqs/databases/ciona/ciona_29.seq 100,000 sequences; 76,841,223 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P606238F.T0/G126P6062... -1 314 1.6e-27 1 scf/ciona01/G126/seq_dir/hrs/G126P612608F.T0/G126P6126... +3 276 3.1e-23 1 scf/ciona01/G126/seq_dir/hrs/G126P608978R.T0/G126P6089... +1 225 1.1e-17 1 scf/ciona01/G126/seq_dir/hrs/G126P606011F.T1/G126P6060... -3 224 1.4e-17 1 scf/ciona01/G126/seq_dir/hrs/G126P604232R.T0/G126P6042... +2 217 9.0e-17 1 scf/ciona01/G126/seq_dir/hrs/G126P606802F.T0/G126P6068... -1 160 3.4e-16 4 scf/ciona01/G126/seq_dir/hrs/G126P606802F.T0/G126P6068... -2 160 4.5e-16 2 scf/ciona01/G126/seq_dir/hrs/G126P607748F.T0/G126P6077... -1 198 1.0e-14 1 scf/ciona01/G126/seq_dir/hrs/G126P607426F.T0/G126P6074... +3 177 1.8e-11 1 scf/ciona01/G126/seq_dir/hrs/G126P612840R.T0/G126P6128... -2 111 2.8e-10 2 scf/ciona01/G126/seq_dir/hrs/G126P612963R.T0/G126P6129... -1 136 1.3e-09 2 scf/ciona01/G126/seq_dir/hrs/G126P607664F.T0/G126P6076... +1 161 1.6e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P608370F.T0/G126P6083... -1 136 2.7e-09 2 scf/ciona01/G126/seq_dir/hrs/G126P608396F.T0/G126P6083... -3 151 4.0e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P612604R.T0/G126P6126... +3 149 6.5e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P612478R.T0/G126P6124... +1 147 1.3e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P608369R.T0/G126P6083... -3 132 1.7e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P608076F.T0/G126P6080... +1 119 1.9e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P612583R.T0/G126P6125... +1 143 3.4e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P607855F.T0/G126P6078... -1 141 7.7e-07 1 scf/ciona01/G126/seq_dir/hrs/G126P612725R.T0/G126P6127... +1 134 8.3e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P608217F.T0/G126P6082... +1 134 4.5e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P612843R.T0/G126P6128... +2 105 2.6e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P613271F.T0/G126P6132... -1 88 2.7e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P612694R.T0/G126P6126... +3 123 7.8e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P608411F.T0/G126P6084... +2 124 8.6e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P608455F.T0/G126P6084... +3 88 8.9e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P608455F.T0/G126P6084... +3 88 9.0e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P604289R.T0/G126P6042... -2 121 0.00015 1 scf/ciona01/G126/seq_dir/hrs/G126P608333R.T0/G126P6083... -2 120 0.00020 1 scf/ciona01/G126/seq_dir/hrs/G126P610204R.T0/G126P6102... -2 105 0.00021 2 scf/ciona01/G126/seq_dir/hrs/G126P607646R.T0/G126P6076... +2 86 0.00024 2 scf/ciona01/G126/seq_dir/hrs/G126P608745R.T0/G126P6087... -3 77 0.0041 2 scf/ciona01/G126/seq_dir/hrs/G126P607442F.T0/G126P6074... -1 108 0.0047 1 scf/ciona01/G126/seq_dir/hrs/G126P612862R.T0/G126P6128... -1 107 0.0058 1 scf/ciona01/G126/seq_dir/hrs/G126P612530R.T0/G126P6125... -2 106 0.0078 1 scf/ciona01/G126/seq_dir/hrs/G126P607046F.T0/G126P6070... +3 106 0.0080 1 scf/ciona01/G126/seq_dir/hrs/G126P607340F.T0/G126P6073... +2 73 0.023 2 scf/ciona01/G126/seq_dir/hrs/G126P611765R.T0/G126P6117... +1 99 0.048 1 scf/ciona01/G126/seq_dir/hrs/G126P607580F.T0/G126P6075... +3 98 0.062 1 scf/ciona01/G126/seq_dir/hrs/G126P607454F.T0/G126P6074... -1 96 0.10 1 scf/ciona01/G126/seq_dir/hrs/G126P605783R.T0/G126P6057... +1 95 0.13 1 scf/ciona01/G126/seq_dir/hrs/G126P608808F.T0/G126P6088... +2 93 0.21 1 scf/ciona01/G126/seq_dir/hrs/G126P608712R.T0/G126P6087... -1 93 0.21 1 scf/ciona01/G126/seq_dir/hrs/G126P607427F.T0/G126P6074... +2 73 0.31 2 scf/ciona01/G126/seq_dir/hrs/G126P612918R.T0/G126P6129... -2 91 0.33 1 scf/ciona01/G126/seq_dir/hrs/G126P606539R.T0/G126P6065... +1 91 0.33 1 scf/ciona01/G126/seq_dir/hrs/G126P612856R.T0/G126P6128... -1 85 0.37 2 scf/ciona01/G126/seq_dir/hrs/G126P608931R.T0/G126P6089... +2 89 0.49 1 scf/ciona01/G126/seq_dir/hrs/G126P612515F.T0/G126P6125... +2 87 0.67 1 scf/ciona01/G126/seq_dir/hrs/G126P608906F.T0/G126P6089... +3 86 0.76 1 scf/ciona01/G126/seq_dir/hrs/G126P608062F.T0/G126P6080... -3 81 0.87 2 scf/ciona01/G126/seq_dir/hrs/G126P607641R.T0/G126P6076... +3 83 0.96 1 scf/ciona01/G126/seq_dir/hrs/G126P612793F.T0/G126P6127... +1 82 0.98 1 scf/ciona01/G126/seq_dir/hrs/G126P612695R.T0/G126P6126... +1 71 0.99 2 scf/ciona01/G126/seq_dir/hrs/G126P607897F.T0/G126P6078... -1 79 0.9999 1 >scf/ciona01/G126/seq_dir/hrs/G126P606238F.T0/G126P606238FE8.T0.seq 771 0 771 ABI Length = 771 Minus Strand HSPs: Score = 314 (110.5 bits), Expect = 1.6e-27, P = 1.6e-27 Identities = 66/183 (36%), Positives = 104/183 (56%), Frame = -1 Query: 295 DENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 DE A+ + ++ + V +LF G DT TA+ W+L+ + NP + +K++ E+D + + Sbjct: 579 DETAS-WWNKYQLFHYVKELFLGGTDTTATALRWALLLIHTNPEIAKKLKAEIDNNV--T 409 Query: 355 RRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQI 414 R +L D +LPY +A I E FR+ V F T+ + G+ IPKG V N W + Sbjct: 408 GRVKLDDMINLPYTQAVIQEVFRYRPVVNFGTMRKTSAVGTATGYRIPKGTIVMPNIWSV 229 Query: 415 NHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAIL 474 +HD W NP F PER L +G K S+ VI F +G+R C+G +A+ E+F+FL + Sbjct: 228 HHDPVRWKNPEVFRPERHLDENGKFKK--SDAVIPFNVGQRSCLGRQLAQTEIFIFLVRM 55 Query: 475 LQR 477 +Q+ Sbjct: 54 MQK 46 >scf/ciona01/G126/seq_dir/hrs/G126P612608F.T0/G126P612608FB7.T0.seq 690 0 690 ABI Length = 690 Plus Strand HSPs: Score = 276 (97.2 bits), Expect = 3.1e-23, P = 3.1e-23 Identities = 59/155 (38%), Positives = 82/155 (52%), Frame = +3 Query: 327 SWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTI 386 SWS++ + +P + E+ V+G P + DR +P AFI E R+ + VP Sbjct: 21 SWSVLAFLYHPEYVSLMYNEIYEVLGSDGVPCMKDRDKMPKTCAFIQEIMRYRTLVPGGA 200 Query: 387 PHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEK 446 PH T D L G+ IP G V N W I++D W P +F P R L DG V S K Sbjct: 201 PHCPTEDVKLYGYDIPAGTMVLANLWAIHNDPTTWPEPEKFDPRRHLDSDGKF--VHSPK 374 Query: 447 VIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFS 481 ++ F +G R C+GE IA+ E+F+FL LLQ+ S Sbjct: 375 ILPFSIGPRYCMGEGIAKTEIFIFLVSLLQKFTIS 479 >scf/ciona01/G126/seq_dir/hrs/G126P608978R.T0/G126P608978RC1.T0.seq 748 0 748 ABI Length = 748 Plus Strand HSPs: Score = 225 (79.2 bits), Expect = 1.1e-17, P = 1.1e-17 Identities = 44/116 (37%), Positives = 65/116 (56%), Frame = +1 Query: 365 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNP 424 +PY A + E+ R P ++ H T D ++K IPKG V N W I +D K W NP Sbjct: 43 MPYTRAVMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNP 222 Query: 425 SEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 F PER +T +G K +EK++ F +G R C+G +A + F+FLA L++ +F Sbjct: 223 ESFRPERHITENGGFTK--NEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFKF 384 >scf/ciona01/G126/seq_dir/hrs/G126P606011F.T1/G126P606011FG7.T1.seq 740 0 740 ABI Length = 740 Minus Strand HSPs: Score = 224 (78.9 bits), Expect = 1.4e-17, P = 1.4e-17 Identities = 41/117 (35%), Positives = 66/117 (56%), Frame = -3 Query: 383 PFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKV 442 P IPH TT DT L+G+++PK +F+NQ+ NHD + WV P +F+PERFL G + Sbjct: 399 PPXIPHVTTEDTVLRGYHLPKETLIFINQYAANHDPEHWVEPDKFIPERFLDEKGNLISR 220 Query: 443 LSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMK 499 ++ ++F G RKC G+ ++R + +A + E S + +Y L+M+ Sbjct: 219 PHDRYLLFSTGSRKCPGDELSRMLILYLMANIFTLCEISPDPNQPTTLDAVYTLSMR 49 Score = 111 (39.1 bits), Expect = 0.0022, P = 0.0022 Identities = 26/62 (41%), Positives = 36/62 (58%), Frame = -2 Query: 343 IQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIP------HSTTRDTSL 396 I ELD+V+ P++ DR+ LPY+EA + E FRHS+F T P H T R +S Sbjct: 520 IHAELDSVLKPGSLPQIKDRARLPYLEAVMHEIFRHSTFTTTTHPSRDHRGHGTPRVSSS 341 Query: 397 KG 398 +G Sbjct: 340 EG 335 >scf/ciona01/G126/seq_dir/hrs/G126P604232R.T0/G126P604232RF7.T0.seq 674 0 674 ABI Length = 674 Plus Strand HSPs: Score = 217 (76.4 bits), Expect = 9.0e-17, P = 9.0e-17 Identities = 43/116 (37%), Positives = 64/116 (55%), Frame = +2 Query: 365 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNP 424 + Y A + E+ R P ++ H T D ++K IPKG V N W I +D K W NP Sbjct: 23 IAYTRAVMYESTRMRPVFPLSLGHQATSDVTVKDNVIPKGTLVVANLWAIQNDPKWWKNP 202 Query: 425 SEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 F PER +T +G K +EK++ F +G R C+G +A + F+FLA L++ +F Sbjct: 203 ESFRPERHITENGGFTK--NEKIVPFSIGPRFCLGSQMATYHQFIFLANLVRTFKF 364 >scf/ciona01/G126/seq_dir/hrs/G126P606802F.T0/G126P606802FH5.T0.seq 733 0 733 ABI Length = 733 Minus Strand HSPs: Score = 160 (56.3 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16 Identities = 33/71 (46%), Positives = 44/71 (61%), Frame = -1 Query: 410 NQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFL 469 N W +++D LW +PS+F PER L G V S VI F +G R C+GE +AR E F+ Sbjct: 310 NIWAVHNDPALWKDPSKFKPERHLDDKGNF--VQSNHVIPFSVGPRHCLGEQMARMEFFI 137 Query: 470 FLAILLQRVEF 480 FL L+Q+ EF Sbjct: 136 FLVSLVQKFEF 104 Score = 66 (23.2 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16 Identities = 12/26 (46%), Positives = 15/26 (57%), Frame = -3 Query: 382 VPFTIPHSTTRDTSLKGFYIPKGRCV 407 VP + H T D +L G+ IPKG V Sbjct: 458 VPLNLTHMTNNDVNLNGYSIPKGTTV 381 Score = 47 (16.5 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16 Identities = 8/26 (30%), Positives = 14/26 (53%), Frame = -2 Query: 353 RSRRPRLSDRSHLPYMEAFILETFRH 378 R + P + +PY AF+ E +R+ Sbjct: 546 RKKHPAMRTNQXMPYTCAFMQEVYRY 469 Score = 45 (15.8 bits), Expect = 3.4e-16, Sum P(4) = 3.4e-16 Identities = 9/24 (37%), Positives = 14/24 (58%), Frame = -1 Query: 323 TTAISWSLMYLVMNPRVQRKIQEE 346 T+ + WSL+ L+ P RK E+ Sbjct: 706 TSTLRWSLLCLIHPPXKYRKSYEK 635 >scf/ciona01/G126/seq_dir/hrs/G126P606802F.T0/G126P606802FA6.T0.seq 736 0 736 ABI Length = 736 Minus Strand HSPs: Score = 160 (56.3 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16 Identities = 33/71 (46%), Positives = 44/71 (61%), Frame = -2 Query: 410 NQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFL 469 N W +++D LW +PS+F PER L G V S VI F +G R C+GE +AR E F+ Sbjct: 306 NIWAVHNDPALWKDPSKFKPERHLDDKGNF--VQSNHVIPFSVGPRHCLGEQMARMEFFI 133 Query: 470 FLAILLQRVEF 480 FL L+Q+ EF Sbjct: 132 FLVSLVQKFEF 100 Score = 101 (35.6 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16 Identities = 18/43 (41%), Positives = 26/43 (60%), Frame = -1 Query: 365 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 +PY AF+ E +R+ + VP + H T D +L G+ IPKG V Sbjct: 505 MPYTCAFMQEVYRYRTLVPLNLTHMTNNDVNLNGYSIPKGTTV 377 >scf/ciona01/G126/seq_dir/hrs/G126P607748F.T0/G126P607748FD11.T0.seq 691 0 691 ABI Length = 691 Minus Strand HSPs: Score = 198 (69.7 bits), Expect = 1.0e-14, P = 1.0e-14 Identities = 47/126 (37%), Positives = 67/126 (53%), Frame = -1 Query: 374 ETFRHSSFVPFTI-PHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWV-NPSEFLPER 431 E R S +PF I TT + L G+ IP G V N W ++HD W +P F PER Sbjct: 568 EVXRXRSALPFNIIARKTTSELKLNGYKIPAGMPVIANLWSVHHDSVTWAPDPEIFRPER 389 Query: 432 FLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKV-DM 490 L DG V S VI F +G R CIG +A+ E+F+F+ +L+R + + G V D+ Sbjct: 388 HLDDDGNF--VPSNHVIPFSVGARSCIGRNLAKNELFVFITSILRRFDLELADGCHVGDI 215 Query: 491 TPIYGLTM 498 + G+ + Sbjct: 214 SGDSGMLL 191 >scf/ciona01/G126/seq_dir/hrs/G126P607426F.T0/G126P607426FF1.T0.seq 753 0 753 ABI Length = 753 Plus Strand HSPs: Score = 177 (62.3 bits), Expect = 1.8e-11, P = 1.8e-11 Identities = 34/76 (44%), Positives = 48/76 (63%), Frame = +3 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 VF+N W +++D+K+W P F+P+R L PDG V S+ ++ FG G R C+GE +AR E Sbjct: 405 VFLNAWGLHNDEKIWETPHLFIPDRHLDPDGNF--VSSKYILPFGAGVRSCLGENLARAE 578 Query: 467 VFLFLAILLQRVEFSV 482 +FL LQ E SV Sbjct: 579 LFLVFVATLQNFELSV 626 >scf/ciona01/G126/seq_dir/hrs/G126P612840R.T0/G126P612840RC1.T0.seq 711 0 711 ABI Length = 711 Minus Strand HSPs: Score = 111 (39.1 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10 Identities = 19/58 (32%), Positives = 34/58 (58%), Frame = -2 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 V G+ + P + +++++PY AF+ E +R+ + PF + H T D +L + IP G V Sbjct: 239 VTGQEKIPAVDNKAYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNEYSIPNGTTV 66 Score = 105 (37.0 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10 Identities = 18/50 (36%), Positives = 36/50 (72%), Frame = -3 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR 353 D+++++ V DLF AG +T T+ + W+L+ L+ +P Q K+++E+ V+G+ Sbjct: 445 DKQLLHYVRDLFFAGSETSTSTLRWTLLCLIHHPEKQEKLRKEIFEVLGK 296 >scf/ciona01/G126/seq_dir/hrs/G126P612963R.T0/G126P612963RG2.T0.seq 714 0 714 ABI Length = 714 Minus Strand HSPs: Score = 136 (47.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09 Identities = 35/94 (37%), Positives = 50/94 (53%), Frame = -1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 M I++S T F+ SV L +W R PK PPGP G PL+G + LG P Sbjct: 501 MFNEINVS-TAFVFLSVFLALYYWYRR------PKNY--PPGPRGIPLLGFLPFLGNYPE 349 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + + S++YG V+ +R+G V+L +TIRQ Sbjct: 348 RTMYKWSKKYGPVMSVRMGRQDWVILGDHETIRQ 247 Score = 69 (24.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09 Identities = 17/48 (35%), Positives = 24/48 (50%), Frame = -2 Query: 96 LVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLK 143 LV QG+ F GRP + T I+ G + D G W +RR + L+ Sbjct: 170 LVNQGNSFSGRPLIATIDQITEGHGILLI-DYGDWWKRQRRFGFSTLR 30 >scf/ciona01/G126/seq_dir/hrs/G126P607664F.T0/G126P607664FE9.T0.seq 706 0 706 ABI Length = 706 Plus Strand HSPs: Score = 161 (56.7 bits), Expect = 1.6e-09, P = 1.6e-09 Identities = 37/105 (35%), Positives = 60/105 (57%), Frame = +1 Query: 399 FY-IPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKC 457 FY I +F N ++ D+ +W +P++F R + DG + S KVI FG+G R C Sbjct: 328 FYSICDSHQIFANLHAVHFDKNIWRHPTKFDFSRHIDKDGKF--ISSRKVIPFGIGARSC 501 Query: 458 IGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMKHACC 503 IGE +AR E+FLF+A +++ E +P +K +P+ + K + C Sbjct: 502 IGEKMARMEIFLFVANIIKAFEI-LPDPLKKPHSPLENMAXKCSSC 636 >scf/ciona01/G126/seq_dir/hrs/G126P608370F.T0/G126P608370FH3.T0.seq 746 0 746 ABI Length = 746 Minus Strand HSPs: Score = 136 (47.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09 Identities = 35/94 (37%), Positives = 50/94 (53%), Frame = -1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 M I++S T F+ SV L +W R PK PPGP G PL+G + LG P Sbjct: 515 MFNEINVS-TAFVFLSVFLALYYWYRR------PKNY--PPGPRGIPLLGFLPFLGNYPE 363 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + + S++YG V+ +R+G V+L +TIRQ Sbjct: 362 RTMYKWSKKYGPVMSVRMGRQDWVILGDHETIRQ 261 Score = 67 (23.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09 Identities = 16/41 (39%), Positives = 21/41 (51%), Frame = -2 Query: 96 LVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRR 136 LV QG+ F GRP + T I+ G + D G W +RR Sbjct: 184 LVNQGNSFSGRPLIATIDQITEGHGILLI-DYGDWWKRQRR 65 >scf/ciona01/G126/seq_dir/hrs/G126P608396F.T0/G126P608396FA8.T0.seq 720 0 720 ABI Length = 720 Minus Strand HSPs: Score = 151 (53.2 bits), Expect = 4.0e-08, P = 4.0e-08 Identities = 37/90 (41%), Positives = 44/90 (48%), Frame = -3 Query: 361 DRSHLPYMEAFILETFRHSSFVPFTI-PHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQK 419 D +PY A + E FR VPF I TT + LKG+ IP G V N W ++HD Sbjct: 319 DECRMPYTRAVMQEVFRFRPAVPFNIIARKTTSELELKGYKIPAGMPVIANLWSVHHDPV 140 Query: 420 LWV-NPSEFLPERFLTPDGAIDKVLSEKVIIF 450 W +P F P R L DG V S VI F Sbjct: 139 TWAPDPEIFRPGRHLDDDGNF--VPSNHVIPF 50 >scf/ciona01/G126/seq_dir/hrs/G126P612604R.T0/G126P612604RH11.T0.seq 707 0 707 ABI Length = 707 Plus Strand HSPs: Score = 149 (52.5 bits), Expect = 6.5e-08, P = 6.5e-08 Identities = 41/137 (29%), Positives = 67/137 (48%), Frame = +3 Query: 13 LLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGD 72 LL ++F L W+ R + +PPGP G PL+G + LGK+P A+ + +Q+YG Sbjct: 264 LLLFIVFYLT-WIFWNRRSPL-----SPPGPRGIPLLGAITQLGKHPEHAMMKWNQKYGP 425 Query: 73 VLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWA 132 V +R+G V++L + +ALV+ RP L G+ + +SG Sbjct: 426 VCMVRLGHKDVLLLGSYEAAYEALVKN-THIADRPP-NGIPLFKGGKGILMI-NSGSFHQ 596 Query: 133 ARRRLAQNGLKSFSIAS 149 +RR N L+ + + S Sbjct: 597 EQRRFGLNTLREYGMGS 647 >scf/ciona01/G126/seq_dir/hrs/G126P612478R.T0/G126P612478RC8.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 147 (51.7 bits), Expect = 1.3e-07, P = 1.3e-07 Identities = 39/144 (27%), Positives = 74/144 (51%), Frame = +1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNP--PGPWGWPLIGHMLTLGKN 58 ML+ +S+ ++ F + V+ C +++ +V G + PG G+P++G LGK+ Sbjct: 175 MLY-LSLFSSNFSIEVVLTCFCLFLLLVYNVRVRHGGTSGTLPGKDGFPIVGCFPMLGKH 351 Query: 59 PHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISN 117 L + S G + IR+G++ V+VL+G + I++AL ++ GR + ++ + Sbjct: 352 KERVLMKWSTSSLGPMFYIRLGTSKVLVLNGYNAIKEALEQKPLAIAGRVESKFVKMLYD 531 Query: 118 GQSMSFSPDSGPVWAARRRLAQNGL 142 G D GP+W +R+ Q L Sbjct: 532 GDHGLIQLDYGPMWKEQRKFGQTTL 606 >scf/ciona01/G126/seq_dir/hrs/G126P608369R.T0/G126P608369RA5.T0.seq 762 0 762 ABI Length = 762 Minus Strand HSPs: Score = 132 (46.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07 Identities = 26/70 (37%), Positives = 43/70 (61%), Frame = -3 Query: 421 WVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 W NP PER L +G K S+ VI F +G+R C+G +A+ E+F+FL ++Q+ +F Sbjct: 628 WKNPGSIRPERHLDENGKFKK--SDAVIPFNVGQRSCLGRQLAQTEIFIFLVRMMQKFDF 455 Query: 481 SVPLGVK-VDM 490 + ++ +DM Sbjct: 454 KIETPLEDLDM 422 Score = 55 (19.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07 Identities = 9/19 (47%), Positives = 12/19 (63%), Frame = -2 Query: 398 GFYIPKGRCVFVNQWQINH 416 G+ IPKG V N W ++H Sbjct: 698 GYRIPKGTIVMPNIWSVHH 642 >scf/ciona01/G126/seq_dir/hrs/G126P608076F.T0/G126P608076FG5.T0.seq 738 0 738 ABI Length = 738 Plus Strand HSPs: Score = 119 (41.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07 Identities = 25/58 (43%), Positives = 36/58 (62%), Frame = +1 Query: 38 KN-PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 KN PPGP G PL+G + LG P + + S++YG V+ +R+G V+L +TIRQ Sbjct: 76 KNYPPGPRGIPLLGFLPFLGNYPERTMYKWSKKYGPVMSVRMGRQDWVILGDHETIRQ 249 Score = 69 (24.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07 Identities = 17/48 (35%), Positives = 24/48 (50%), Frame = +2 Query: 96 LVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLK 143 LV QG+ F GRP + T I+ G + D G W +RR + L+ Sbjct: 326 LVNQGNSFSGRPLIATIDQITEGHGILLI-DYGDWWKRQRRFGFSTLR 466 >scf/ciona01/G126/seq_dir/hrs/G126P612583R.T0/G126P612583RA7.T0.seq 698 0 698 ABI Length = 698 Plus Strand HSPs: Score = 143 (50.3 bits), Expect = 3.4e-07, P = 3.4e-07 Identities = 37/102 (36%), Positives = 58/102 (56%), Frame = +1 Query: 13 LLASVIFCL--VFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQY 70 LL +++F L +FW R+ P +PPGP G PLIG + +GK+P A+ + +QQY Sbjct: 283 LLLAIVFYLTRLFWNRRS--PL------SPPGPRGIPLIGAITKIGKHPEHAMMKWNQQY 438 Query: 71 GDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTL 114 G V +R+G V+VL + +ALV+ RP + + +L Sbjct: 439 GPVCMVRLGFKDVLVLGSYEAAHEALVKN-THIADRPQMESQSL 567 >scf/ciona01/G126/seq_dir/hrs/G126P607855F.T0/G126P607855FF5.T0.seq 747 0 747 ABI Length = 747 Minus Strand HSPs: Score = 141 (49.6 bits), Expect = 7.7e-07, P = 7.7e-07 Identities = 31/71 (43%), Positives = 41/71 (57%), Frame = -1 Query: 420 LWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVE 479 +W NP EF PER L +G K S+KV+ F +G R C+G+ +A E+FL L R Sbjct: 696 IWKNPYEFNPERHLDANGNFVK--SKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFS 523 Query: 480 FSVPLGVKVDM 490 F + G KVDM Sbjct: 522 FRLKPGEKVDM 490 >scf/ciona01/G126/seq_dir/hrs/G126P612725R.T0/G126P612725RD2.T0.seq 714 0 714 ABI Length = 714 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07 Identities = 29/63 (46%), Positives = 40/63 (63%), Frame = +1 Query: 417 DQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQ 476 D +W NPS+F R + DG V S+KVI FG+G R CIGE +AR E ++FL +++ Sbjct: 205 DPNIWKNPSKFDIYRHINKDGKF--VPSKKVIPFGIGARACIGEKLARIETYVFLTNIVK 378 Query: 477 RVE 479 R E Sbjct: 379 RFE 387 Score = 44 (15.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07 Identities = 7/14 (50%), Positives = 10/14 (71%), Frame = +3 Query: 390 TTRDTSLKGFYIPK 403 TT+D + G +IPK Sbjct: 63 TTKDVEINGHFIPK 104 >scf/ciona01/G126/seq_dir/hrs/G126P608217F.T0/G126P608217FC3.T0.seq 712 0 712 ABI Length = 712 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 4.5e-06, P = 4.5e-06 Identities = 35/94 (37%), Positives = 50/94 (53%), Frame = +1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 ML I++S T F+ +V L +W R PK PPGP G P +G + LG P Sbjct: 232 MLNEINVS-TSFIFLTVFLGLYYWYRR------PKNF--PPGPRGIPFLGVLPFLGNYPE 384 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + + S+QYG V+ +R+G VVL +TI+Q Sbjct: 385 RKMRKWSKQYGPVMSVRMGRQDWVVLGDYETIQQ 486 >scf/ciona01/G126/seq_dir/hrs/G126P612843R.T0/G126P612843RC7.T0.seq 685 0 685 ABI Length = 685 Plus Strand HSPs: Score = 105 (37.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05 Identities = 26/85 (30%), Positives = 44/85 (51%), Frame = +2 Query: 14 LASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDV 73 L +++ + +W R P + PPGP G PL+G + +GK P + + YG V Sbjct: 158 LVTILAAVYYWYKR------PSNM--PPGPRGIPLLGVVPFVGKVPEQVFFKSKKDYGSV 313 Query: 74 LQIRIGSTPVVVLSGLDTIRQALVR 98 + +R+G VVL+ ++I Q V+ Sbjct: 314 MTVRMGREDWVVLNDYESIYQVGVK 388 Score = 63 (22.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05 Identities = 14/43 (32%), Positives = 22/43 (51%), Frame = +2 Query: 94 QALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRR 136 Q LV+QG F GRP + ++ G + D G W ++R+ Sbjct: 491 QTLVKQGSIFSGRPSIPILEEMTKGHGILLL-DYGEKWKSQRK 616 >scf/ciona01/G126/seq_dir/hrs/G126P613271F.T0/G126P613271FF3.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 88 (31.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05 Identities = 19/59 (32%), Positives = 29/59 (49%), Frame = -1 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVF 408 ++G P R +P+ AFI E+ R+ + VP H D + G+ IPKG V+ Sbjct: 293 IVGADGIPSSKLREKMPFTCAFIQESVRYFTVVPMGSQHYCQEDIKINGYTIPKGTTVW 117 Score = 83 (29.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05 Identities = 13/51 (25%), Positives = 34/51 (66%), Frame = -1 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 ++++ +I+ D+F AG +T + ++ W + L+ +P+ + I +E+D +G++ Sbjct: 491 EDELNSIIRDMFVAGSETTSNSLLWCFVLLMHHPKHKETIVKEIDEAMGKN 339 >scf/ciona01/G126/seq_dir/hrs/G126P612694R.T0/G126P612694RF8.T0.seq 684 0 684 ABI Length = 684 Plus Strand HSPs: Score = 123 (43.3 bits), Expect = 7.8e-05, P = 7.8e-05 Identities = 33/87 (37%), Positives = 47/87 (54%), Frame = +3 Query: 12 FLLASVIFCLVFWVIR-ASRPQVPKGLKN-PPGPWGWPLIGHMLTLGKNPHLALSRMSQQ 69 F+ V+FCLV ++ R SRP KN PPGP G P++G G L+ ++ Sbjct: 351 FMFXGVVFCLVCYLFRWKSRP------KNFPPGPLGIPMLGVAPFAGSKLENYLASFYKK 512 Query: 70 YGDVLQIRIGSTPVVVLSGLDTIRQALVR 98 YG V+ R+G VVL+ L+ I Q +R Sbjct: 513 YGGVMSFRLGPKDWVVLNDLEAITQV*LR 599 >scf/ciona01/G126/seq_dir/hrs/G126P608411F.T0/G126P608411FH6.T0.seq 813 0 813 ABI Length = 813 Plus Strand HSPs: Score = 124 (43.7 bits), Expect = 8.6e-05, P = 8.6e-05 Identities = 31/75 (41%), Positives = 41/75 (54%), Frame = +2 Query: 421 WV-NPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVE 479 W +P +F PER L DG V S+ VI F +G R+C+GE IAR E+F L L E Sbjct: 71 WAPDPDDFRPERHLDDDGLF--VNSDHVIPFSVGWRRCVGEKIARTEIFAHLVTTLNTFE 244 Query: 480 FSV-PLGVKVDMTPIYG 495 + P V +D+ G Sbjct: 245 VDLHPDDVGIDLAAFPG 295 >scf/ciona01/G126/seq_dir/hrs/G126P608455F.T0/G126P608455FF8.T0.seq 728 0 728 ABI Length = 728 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05 Identities = 18/39 (46%), Positives = 23/39 (58%), Frame = +3 Query: 365 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK 403 LP AFI E R+ + V I H TT+D +KG+ IPK Sbjct: 483 LPLFRAFIQEILRYKTTVILGIQHLTTKDVDIKGYRIPK 599 Score = 78 (27.5 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05 Identities = 16/48 (33%), Positives = 29/48 (60%), Frame = +3 Query: 305 EKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 +++++ + DLF AG +T TT + W ++ ++ P +Q I EL IG Sbjct: 81 KQLLHSISDLFIAGTETTTTTLLWCMIAMLHFPDIQALIYNELMQEIG 224 >scf/ciona01/G126/seq_dir/hrs/G126P608455F.T0/G126P608455FG8.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 88 (31.0 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05 Identities = 18/39 (46%), Positives = 23/39 (58%), Frame = +3 Query: 365 LPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK 403 LP AFI E R+ + V I H TT+D +KG+ IPK Sbjct: 471 LPLFRAFIQEILRYKTTVILGIQHLTTKDVDIKGYRIPK 587 Score = 78 (27.5 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05 Identities = 16/48 (33%), Positives = 29/48 (60%), Frame = +3 Query: 305 EKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 +++++ + DLF AG +T TT + W ++ ++ P +Q I EL IG Sbjct: 69 KQLLHSISDLFIAGTETTTTTLLWCMIAMLHFPDIQALIYNELMQEIG 212 >scf/ciona01/G126/seq_dir/hrs/G126P604289R.T0/G126P604289RA1.T0.seq 730 0 730 ABI Length = 730 Minus Strand HSPs: Score = 121 (42.6 bits), Expect = 0.00015, P = 0.00015 Identities = 27/63 (42%), Positives = 36/63 (57%), Frame = -2 Query: 421 WVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 W NP F P R + G S VI F +G R C+GE +AR E+F+FL +LQ+ E Sbjct: 639 WPNPFAFDPHRHIDDKGKYRN--SRNVIPFSIGPRSCLGEALARQEMFIFLIAILQKYEI 466 Query: 481 S-VP 483 + VP Sbjct: 465 NPVP 454 >scf/ciona01/G126/seq_dir/hrs/G126P608333R.T0/G126P608333RD12.T0.seq 722 0 722 ABI Length = 722 Minus Strand HSPs: Score = 120 (42.2 bits), Expect = 0.00020, P = 0.00020 Identities = 27/63 (42%), Positives = 36/63 (57%), Frame = -2 Query: 421 WVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 W NP F P R + G S KVI F +G R C+GE +A E+F+FL +LQ+ E Sbjct: 661 WANPFPFDPYRHIDDKGKYRN--SSKVIPFSIGPRSCLGEVLAMQEMFVFLTAILQKYEI 488 Query: 481 S-VP 483 + VP Sbjct: 487 NPVP 476 >scf/ciona01/G126/seq_dir/hrs/G126P610204R.T0/G126P610204RA6.T0.seq 723 0 723 ABI Length = 723 Minus Strand HSPs: Score = 105 (37.0 bits), Expect = 0.00021, Sum P(2) = 0.00021 Identities = 18/50 (36%), Positives = 36/50 (72%), Frame = -2 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR 353 D+++++ V DLF AG +T T+ + W+L+ L+ +P Q K+++E+ V+G+ Sbjct: 323 DKQLLHYVRDLFFAGSETSTSTLRWTLLCLIHHPEKQEKLRKEIFEVLGK 174 Score = 55 (19.4 bits), Expect = 0.00021, Sum P(2) = 0.00021 Identities = 9/28 (32%), Positives = 19/28 (67%), Frame = -1 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFR 377 V G+ + P + +++++PY AF+ E +R Sbjct: 117 VTGQEKIPAVDNKAYMPYTCAFMQEVYR 34 >scf/ciona01/G126/seq_dir/hrs/G126P607646R.T0/G126P607646RH2.T0.seq 725 0 725 ABI Length = 725 Plus Strand HSPs: Score = 86 (30.3 bits), Expect = 0.00024, Sum P(2) = 0.00024 Identities = 22/66 (33%), Positives = 31/66 (46%), Frame = +2 Query: 351 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVN 410 IG + +L R LP AFI ET R PHS + ++ G+ IP G V V Sbjct: 479 IGENGSLKLDHRRQLPLTCAFIQETLRLRPIGSLNAPHSASETVTVNGYTIPAGTMVSV- 655 Query: 411 QWQINH 416 W+ ++ Sbjct: 656 -WKSSY 670 Score = 76 (26.8 bits), Expect = 0.00024, Sum P(2) = 0.00024 Identities = 23/79 (29%), Positives = 37/79 (46%), Frame = +3 Query: 275 KGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLV 334 K H+ + + H K D D ++ +V +L AG +T T +SW L+ Sbjct: 15 KPHLVXFLELKVTHLTSKNFDSTICC-FQDLQLCILVRELLLAGNETTGTQLSW-LIVAA 188 Query: 335 MN-PRVQRKIQEELDTVIGR 353 MN P KI +E+ +IG+ Sbjct: 189 MNYPEWHDKIHKEIIDLIGK 248 >scf/ciona01/G126/seq_dir/hrs/G126P608745R.T0/G126P608745RD1.T0.seq 734 0 734 ABI Length = 734 Minus Strand HSPs: Score = 77 (27.1 bits), Expect = 0.0041, Sum P(2) = 0.0041 Identities = 20/53 (37%), Positives = 27/53 (50%), Frame = -3 Query: 94 QALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFS 146 QAL+ QGD F GR + L SNG + F G W +R+ G++ FS Sbjct: 180 QALINQGDKFNGRVHNFFTNLSSNGHGILFV--EGEKWRIQRKF---GIRVFS 37 Score = 74 (26.0 bits), Expect = 0.0041, Sum P(2) = 0.0041 Identities = 15/53 (28%), Positives = 29/53 (54%), Frame = -1 Query: 45 GWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 97 G P++G + + L ++ S++YG + + +G T VVVL+ + I + V Sbjct: 668 GVPILGCLPFMDTLAELTFTKWSKKYGPIFTVYLGQTRVVVLNSYEAIEEVRV 510 >scf/ciona01/G126/seq_dir/hrs/G126P607442F.T0/G126P607442FE9.T0.seq 722 0 722 ABI Length = 722 Minus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0047, P = 0.0047 Identities = 22/61 (36%), Positives = 37/61 (60%), Frame = -1 Query: 350 VIGRSRR-PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVF 408 ++ RS+ P L+ + +LP ++AFI E +R+ + +P + H T D L G++IPK V Sbjct: 656 ILHRSKTSPVLTTKXNLPKLQAFIQEIYRNLTLLPLGVQHKTMTDVELCGYHIPKNTVVR 477 Query: 409 V 409 V Sbjct: 476 V 474 >scf/ciona01/G126/seq_dir/hrs/G126P612862R.T0/G126P612862RA4.T0.seq 707 0 707 ABI Length = 707 Minus Strand HSPs: Score = 107 (37.7 bits), Expect = 0.0059, P = 0.0058 Identities = 18/52 (34%), Positives = 31/52 (59%), Frame = -1 Query: 357 PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVF 408 P + + +LP + AFI E +R+ + P +I H T+ D + G++IPK V+ Sbjct: 239 PSVDHKDNLPLLRAFIQEVYRYQTIKPLSIKHRTSEDVEIGGYFIPKDTTVW 84 >scf/ciona01/G126/seq_dir/hrs/G126P612530R.T0/G126P612530RB10.T0.seq 717 0 717 ABI Length = 717 Minus Strand HSPs: Score = 106 (37.3 bits), Expect = 0.0078, P = 0.0078 Identities = 25/75 (33%), Positives = 39/75 (52%), Frame = -2 Query: 329 SLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPH 388 SL ++P + D GR + LS +++LPY +A + ET+R + P IP Sbjct: 674 SLAVTTLHPITLSTTYADCDYFKGRDGK--LSLKTNLPYTKAVLQETYRIRTVTPLAIPR 501 Query: 389 STTRDTSLKGFYIPK 403 T D +L G++IPK Sbjct: 500 RTRGDVNLMGYFIPK 456 >scf/ciona01/G126/seq_dir/hrs/G126P607046F.T0/G126P607046FE7.T0.seq 730 0 730 ABI Length = 730 Plus Strand HSPs: Score = 106 (37.3 bits), Expect = 0.0080, P = 0.0080 Identities = 26/63 (41%), Positives = 36/63 (57%), Frame = +3 Query: 428 LPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK 487 L R L P+G K S+KV+ F +G R C+G+ +A E+FL L R FSV + K Sbjct: 78 LSXRHLPPNGNFVK--SKKVMQFNIGLRSCLGQQLANMELFLVTVSLFHRFSFSV-VNPK 248 Query: 488 VDM 490 +DM Sbjct: 249 IDM 257 >scf/ciona01/G126/seq_dir/hrs/G126P607340F.T0/G126P607340FH12.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 73 (25.7 bits), Expect = 0.023, Sum P(2) = 0.023 Identities = 18/49 (36%), Positives = 23/49 (46%), Frame = +2 Query: 94 QALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGL 142 QAL+ QGD F GR + L SNG + F G W +R+ L Sbjct: 482 QALINQGDKFNGRVHNFFTNLSSNGHGILFI--EGEKWRIQRKFGIRAL 622 Score = 71 (25.0 bits), Expect = 0.023, Sum P(2) = 0.023 Identities = 15/35 (42%), Positives = 22/35 (62%), Frame = +1 Query: 63 LSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 97 LSRM Q+ G +L + +G T VVVL+ + I + V Sbjct: 58 LSRMVQEVGPILTVYLGQTRVVVLNSYEAIEEVRV 162 >scf/ciona01/G126/seq_dir/hrs/G126P611765R.T0/G126P611765RE9.T0.seq 719 0 719 ABI Length = 719 Plus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.049, P = 0.048 Identities = 24/58 (41%), Positives = 33/58 (56%), Frame = +1 Query: 41 PGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YGDVLQIRIGSTPVVVLSGLDTIRQALV 97 PG G+PL+G LGK+ L + S G V R+G++ V+VL G D I+ ALV Sbjct: 496 PGKDGFPLVGCFPLLGKHKERMLMKWSSSGLGPVFYARLGASRVLVLDGYDEIKDALV 669 >scf/ciona01/G126/seq_dir/hrs/G126P607580F.T0/G126P607580FG11.T0.seq 717 0 717 ABI Length = 717 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.064, P = 0.062 Identities = 24/75 (32%), Positives = 38/75 (50%), Frame = +3 Query: 329 SLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPH 388 SL ++P + D GR + LS +++LPY +A + ET+ + P IP Sbjct: 213 SLTLTTLHPITLSTTYADCDYFKGRDGK--LSLKTNLPYTKAVLQETYIIRTVTPLAIPR 386 Query: 389 STTRDTSLKGFYIPK 403 T D +L G++IPK Sbjct: 387 RTRGDVNLMGYFIPK 431 >scf/ciona01/G126/seq_dir/hrs/G126P607454F.T0/G126P607454FD7.T0.seq 729 0 729 ABI Length = 729 Minus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.11, P = 0.10 Identities = 22/71 (30%), Positives = 38/71 (53%), Frame = -1 Query: 34 PKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTI 92 P G PPGP G P +G + +GK P + + S ++YG ++ R+GS + L+ + I Sbjct: 531 PSGF--PPGPRGIPFLGVISFMGKYPERTIKKWSLEKYGTIMCARMGSADCIFLNTAEVI 358 Query: 93 RQALVRQGDDFK 104 ++ + FK Sbjct: 357 KKVTLLTKP*FK 322 >scf/ciona01/G126/seq_dir/hrs/G126P605783R.T0/G126P605783RF2.T0.seq 710 0 710 ABI Length = 710 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.14, P = 0.13 Identities = 18/55 (32%), Positives = 34/55 (61%), Frame = +1 Query: 65 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQ 119 ++ +YG ++ +++ VVL+ +++I +ALV+QG F GRPD F + G+ Sbjct: 292 KIGWKYGPIVGVKLLRKFTVVLNSVESINEALVKQGHIFSGRPDSIMFQAFTGGK 456 >scf/ciona01/G126/seq_dir/hrs/G126P608808F.T0/G126P608808FH7.T0.seq 739 0 739 ABI Length = 739 Plus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.24, P = 0.21 Identities = 18/46 (39%), Positives = 25/46 (54%), Frame = +2 Query: 392 RDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDG 437 R+ + G+ IPKG + I+ D K W NP++F P FL DG Sbjct: 560 RNQKVAGYEIPKGTSIMPCYHSIHFDPKFWKNPNQFDPTNFLENDG 697 >scf/ciona01/G126/seq_dir/hrs/G126P608712R.T0/G126P608712RH2.T0.seq 743 0 743 ABI Length = 743 Minus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.24, P = 0.21 Identities = 19/56 (33%), Positives = 33/56 (58%), Frame = -1 Query: 40 PPGPWGWPLIGHMLTLGKNPHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 PPGP G P +G + +GK P + + S ++YG ++ R+GS V L+ + I++ Sbjct: 608 PPGPRGIPFLGVIPFMGKYPERTIKKWSLEKYGTIMCARMGSADCVFLNTAEVIKK 441 >scf/ciona01/G126/seq_dir/hrs/G126P607427F.T0/G126P607427FB1.T0.seq 728 0 728 ABI Length = 728 Plus Strand HSPs: Score = 73 (25.7 bits), Expect = 0.37, Sum P(2) = 0.31 Identities = 18/49 (36%), Positives = 25/49 (51%), Frame = +2 Query: 95 ALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLK 143 ALV QG+ F GRP + T I+ G + D G W +RR + L+ Sbjct: 239 ALVNQGNSFSGRPLIATIDQITEGHGILLI-DYGDWWKRQRRFGFSTLR 382 Score = 59 (20.8 bits), Expect = 0.37, Sum P(2) = 0.31 Identities = 12/30 (40%), Positives = 19/30 (63%), Frame = +3 Query: 65 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 +M Q+ G V+ +R+G V+L +TIRQ Sbjct: 81 QMEQKVGPVMSVRMGRQDWVILGDHETIRQ 170 >scf/ciona01/G126/seq_dir/hrs/G126P612918R.T0/G126P612918RC7.T0.seq 746 0 746 ABI Length = 746 Minus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.41, P = 0.33 Identities = 17/46 (36%), Positives = 26/46 (56%), Frame = -2 Query: 362 RSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 ++ LPY A I E R+ + P +PH T+ D L ++IP+G V Sbjct: 661 KADLPYTSAXIHEVCRYRTIFPLGLPHKTSYDVLLDSYFIPQGTTV 524 >scf/ciona01/G126/seq_dir/hrs/G126P606539R.T0/G126P606539RA12.T0.seq 744 0 744 ABI Length = 744 Plus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.41, P = 0.33 Identities = 22/59 (37%), Positives = 35/59 (59%), Frame = +1 Query: 34 PKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTI 92 P G PPGP G P +G + L P L + S ++YG V+ R+G++ VVVL+ +++ Sbjct: 142 PNGF--PPGPRGIPFLGVIPFLDNFPEKLLKKWSLKKYGAVMSARLGTSDVVVLNTPESV 315 >scf/ciona01/G126/seq_dir/hrs/G126P612856R.T0/G126P612856RH7.T0.seq 691 0 691 ABI Length = 691 Minus Strand HSPs: Score = 85 (29.9 bits), Expect = 0.47, Sum P(2) = 0.37 Identities = 17/56 (30%), Positives = 31/56 (55%), Frame = -1 Query: 42 GPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 97 GP G P++G + + L ++ S++YG + + +G T VVVL+ + I + V Sbjct: 553 GPTGVPILGCLPFMDTLAELTFTKWSKKYGPIFTVYLGQTRVVVLNSYEAIEEVRV 386 Score = 44 (15.5 bits), Expect = 0.47, Sum P(2) = 0.37 Identities = 8/12 (66%), Positives = 9/12 (75%), Frame = -3 Query: 94 QALVRQGDDFKG 105 QAL+ QGD F G Sbjct: 56 QALINQGDKFNG 21 >scf/ciona01/G126/seq_dir/hrs/G126P608931R.T0/G126P608931RF3.T0.seq 728 0 728 ABI Length = 728 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.67, P = 0.49 Identities = 18/56 (32%), Positives = 32/56 (57%), Frame = +2 Query: 40 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YGDVLQIRIGSTPVVVLSGLDTIRQ 94 PPG G P++G G+ P +++ S++ YG V+ +R G VVL+ ++I + Sbjct: 191 PPGVRGIPILGATPFFGRYPQETIAKWSREKYGPVMSVRFGQEDAVVLNDYESIHE 358 >scf/ciona01/G126/seq_dir/hrs/G126P612515F.T0/G126P612515FG9.T0.seq 715 0 715 ABI Length = 715 Plus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.1, P = 0.67 Identities = 19/50 (38%), Positives = 30/50 (60%), Frame = +2 Query: 302 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVI 351 L +E + V DLF A DT ++ I W +++L N VQ +QEE+D ++ Sbjct: 566 LINEPLCLKVRDLFMAATDTTSSTICWIILFLCKNTDVQIXMQEEIDELL 715 >scf/ciona01/G126/seq_dir/hrs/G126P608906F.T0/G126P608906FH11.T0.seq 724 0 724 ABI Length = 724 Plus Strand HSPs: Score = 86 (30.3 bits), Expect = 1.4, P = 0.76 Identities = 19/45 (42%), Positives = 23/45 (51%), Frame = +3 Query: 361 DRSHLPYMEAFILETFRHSSFVPFTI-PHSTTRDTSLKGFYIPKG 404 D +PY A + E FR VPF I TT + LKG+ IP G Sbjct: 576 DECRMPYTRAVMQEVFRFRPAVPFNIIARKTTSELELKGYKIPAG 710 >scf/ciona01/G126/seq_dir/hrs/G126P608062F.T0/G126P608062FF4.T0.seq 748 0 748 ABI Length = 748 Minus Strand HSPs: Score = 81 (28.5 bits), Expect = 2.0, Sum P(2) = 0.87 Identities = 15/31 (48%), Positives = 22/31 (70%), Frame = -3 Query: 453 GKRKCIGETIARWEVFLFLAILLQRVEFSVP 483 GKR C GE++AR +F+ +A LLQ +E +P Sbjct: 578 GKRSCAGESLARANLFIVVATLLQHLELLMP 486 Score = 43 (15.1 bits), Expect = 2.0, Sum P(2) = 0.87 Identities = 10/32 (31%), Positives = 15/32 (46%), Frame = -3 Query: 423 NPSEFLPERFLTPDGAIDKVLSEKVIIFGMGK 454 N + F P+R + G K L + G+GK Sbjct: 737 NRTSFNPDRVINEKGGFRKELLQHFFPSGIGK 642 >scf/ciona01/G126/seq_dir/hrs/G126P607641R.T0/G126P607641RB5.T0.seq 777 0 777 ABI Length = 777 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.3, P = 0.96 Identities = 16/51 (31%), Positives = 26/51 (50%), Frame = +3 Query: 357 PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 P + +LP ++AFI E +R + P + + T D + G +IPK V Sbjct: 390 PSVKHGDNLPLLQAFIQELYRCITIAPLGLQRTNTEDVEIGGHFIPKNTVV 542 >scf/ciona01/G126/seq_dir/hrs/G126P612793F.T0/G126P612793FB1.T0.seq 699 0 699 ABI Length = 699 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 3.9, P = 0.98 Identities = 13/45 (28%), Positives = 28/45 (62%), Frame = +1 Query: 307 IINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVI 351 ++ ++ D+ AG T ++ W +++++ NP ++Q ELDTV+ Sbjct: 541 LVALIQDMLFAGSITTSSEFLWVIIFVLKNPNCMHRLQAELDTVL 675 >scf/ciona01/G126/seq_dir/hrs/G126P612695R.T0/G126P612695RG5.T0.seq 715 0 715 ABI Length = 715 Plus Strand HSPs: Score = 71 (25.0 bits), Expect = 4.6, Sum P(2) = 0.99 Identities = 16/41 (39%), Positives = 21/41 (51%), Frame = +1 Query: 96 LVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRR 136 LV+QG+ F GRP + IS G + F D W +RR Sbjct: 478 LVKQGNSFSGRPSIAILDQISEGHGLLFI-DYDKQWKRQRR 597 Score = 50 (17.6 bits), Expect = 4.6, Sum P(2) = 0.99 Identities = 11/26 (42%), Positives = 16/26 (61%), Frame = +2 Query: 69 QYGDVLQIRIGSTPVVVLSGLDTIRQ 94 Q G V+ +R+G VVL +TI+Q Sbjct: 32 QDGSVMSVRMGRQDWVVLGDYETIQQ 109 >scf/ciona01/G126/seq_dir/hrs/G126P607897F.T0/G126P607897FD2.T0.seq 741 0 741 ABI Length = 741 Minus Strand HSPs: Score = 79 (27.8 bits), Expect = 8.9, P = 1.00 Identities = 24/73 (32%), Positives = 36/73 (49%), Frame = -1 Query: 72 DVLQIRIGSTPVVVLS-G--LDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSG 128 D+ IRIG ++V G L + A +QG+ F GRP F ++ G + F+ +G Sbjct: 705 DICLIRIGYLLLIVSKFG*FLRVLL*AFSKQGESFSGRPKSVVFDQLTQGCGIVFA--NG 532 Query: 129 PVWAARRRLAQNGLK 143 W +RR LK Sbjct: 531 DRWQHQRRFVLTALK 487 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.139 0.426 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 512 512 10. 74 3 13 22 0.065 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_29.seq Title: /seqs/databases/ciona/ciona_29.seq Release date: unknown Posted date: 3:10 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 76,841,223 # of sequences in database: 100,000 # of database sequences satisfying E: 56 No. of states in DFA: 554 (59 KB) Total size of DFA: 108 KB (128 KB) Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.47u 0.18s 13.65t Elapsed: 00:00:17 Total cpu time: 13.49u 0.21s 13.70t Elapsed: 00:00:18 Start: Mon Apr 1 21:45:11 2002 End: Mon Apr 1 21:45:29 2002