TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 1_CYP1A1_NM_000499 (512 letters) Database: /seqs/databases/ciona/ciona_22.seq 100,000 sequences; 78,616,084 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P608515F.T0/G126P6085... -1 246 6.2e-20 1 scf/ciona01/G126/seq_dir/hrs/G126P608780R.T0/G126P6087... -1 161 7.3e-18 2 scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P6063... +1 134 9.7e-13 2 scf/ciona01/G126/seq_dir/hrs/G126P606529R.T0/G126P6065... -1 177 1.9e-12 1 scf/ciona01/G126/seq_dir/hrs/G126P608782R.T0/G126P6087... +3 177 7.4e-12 1 scf/ciona01/G126/seq_dir/hrs/G126P609056R.T0/G126P6090... +2 177 2.5e-11 1 scf/ciona01/G126/seq_dir/hrs/G126P609268F.T0/G126P6092... -3 160 2.7e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P608491F.T0/G126P6084... +2 152 3.9e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P609267F.T0/G126P6092... +2 122 1.3e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P608339R.T0/G126P6083... -2 140 1.1e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P608029F.T0/G126P6080... -3 139 1.2e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P608432F.T0/G126P6084... -1 126 3.5e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P609153F.T0/G126P6091... +2 126 4.2e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P609254R.T0/G126P6092... -2 90 4.9e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P608718R.T0/G126P6087... +2 125 5.5e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P604805R.T0/G126P6048... +3 122 0.00013 1 scf/ciona01/G126/seq_dir/hrs/G126P608171R.T0/G126P6081... +1 118 0.00036 1 scf/ciona01/G126/seq_dir/hrs/G126P609032F.T0/G126P6090... -2 116 0.00058 1 scf/ciona01/G126/seq_dir/hrs/G126P608901F.T0/G126P6089... -1 114 0.0010 1 scf/ciona01/G126/seq_dir/hrs/G126P609299F.T0/G126P6092... -2 113 0.0012 1 scf/ciona01/G126/seq_dir/hrs/G126P607987R.T0/G126P6079... -3 113 0.0013 1 scf/ciona01/G126/seq_dir/hrs/G126P608147F.T0/G126P6081... -1 113 0.0013 1 scf/ciona01/G126/seq_dir/hrs/G126P608592R.T0/G126P6085... +1 113 0.0013 1 scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P6089... +1 112 0.0018 1 scf/ciona01/G126/seq_dir/hrs/G126P609438F.T0/G126P6094... +1 108 0.0047 1 scf/ciona01/G126/seq_dir/hrs/G126P608882R.T0/G126P6088... +2 105 0.011 1 scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P6089... +2 104 0.015 1 scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P6063... -1 99 0.050 1 scf/ciona01/G126/seq_dir/hrs/G126P608373R.T0/G126P6083... +1 98 0.066 1 scf/ciona01/G126/seq_dir/hrs/G126P609292F.T0/G126P6092... -1 96 0.14 1 scf/ciona01/G126/seq_dir/hrs/G126P608763F.T0/G126P6087... -1 94 0.17 1 scf/ciona01/G126/seq_dir/hrs/G126P608824R.T0/G126P6088... -2 86 0.20 2 scf/ciona01/G126/seq_dir/hrs/G126P608309F.T0/G126P6083... +1 90 0.41 1 scf/ciona01/G126/seq_dir/hrs/G126P608154R.T0/G126P6081... -2 89 0.49 1 scf/ciona01/G126/seq_dir/hrs/G126P608103R.T0/G126P6081... -1 67 0.87 2 scf/ciona01/G126/seq_dir/hrs/G126P607984F.T0/G126P6079... +1 84 0.91 1 scf/ciona01/G126/seq_dir/hrs/G126P608816R.T0/G126P6088... -3 84 0.92 1 scf/ciona01/G126/seq_dir/hrs/G126P608847F.T0/G126P6088... +1 83 0.96 1 scf/ciona01/G126/seq_dir/hrs/G126P608944R.T0/G126P6089... +2 82 0.98 1 scf/ciona01/G126/seq_dir/hrs/G126P608877F.T0/G126P6088... -1 65 0.999 2 >scf/ciona01/G126/seq_dir/hrs/G126P608515F.T0/G126P608515FG6.T0.seq 690 0 690 ABI Length = 690 Minus Strand HSPs: Score = 246 (86.6 bits), Expect = 6.2e-20, P = 6.2e-20 Identities = 54/132 (40%), Positives = 73/132 (55%), Frame = -1 Query: 351 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVN 410 IG S P +S + +PY+ AFI E R + IPH T D L G+ IPKG V N Sbjct: 447 IG-SAVPNMSHQEKMPYLRAFIQEVHRFQTIAVLNIPHCVTEDCILYGYRIPKGTPVMSN 271 Query: 411 QWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLF 470 W +++D W P +F PER L DG + S +VI F +G R C+G +A+ E+FLF Sbjct: 270 IWFVHNDPAHWQEPQKFRPERHLDGDGKF--IPSNRVIPFSVGHRSCLGVQLAKAELFLF 97 Query: 471 LAILLQRVEFSV 482 A +L+ EF V Sbjct: 96 YAGVLKHHEFQV 61 >scf/ciona01/G126/seq_dir/hrs/G126P608780R.T0/G126P608780RD7.T0.seq 751 0 751 ABI Length = 751 Minus Strand HSPs: Score = 161 (56.7 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18 Identities = 27/61 (44%), Positives = 37/61 (60%), Frame = -1 Query: 367 YMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSE 426 + EA I RH SFVPF +PH+ DT+L G+ IP G + ++ +NHD LW +P E Sbjct: 733 FREALITXVSRHCSFVPFALPHAPVEDTTLNGYLIPSGTVMMISMRSVNHDHTLWDSPGE 554 Query: 427 F 427 F Sbjct: 553 F 551 Score = 118 (41.5 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18 Identities = 32/80 (40%), Positives = 50/80 (62%), Frame = -2 Query: 429 PERF-LTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLF-LAIL----LQRVEFSV 482 PERF L+ G +K L+++V++FG G+R+C GE +AR ++FLF ++IL ++RV+ S Sbjct: 258 PERFILSETGVFNKGLADRVMLFGGGRRRCAGEALARMQLFLFSVSILRSCTIRRVDHS- 82 Query: 483 PLGVKVDMTPIYGLTMKHACCEH 505 V D P L K+ H Sbjct: 81 --DVLPDALPGISLIPKNRIPPH 19 >scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P606393FD9.T0.seq 750 0 750 ABI Length = 750 Plus Strand HSPs: Score = 134 (47.2 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13 Identities = 29/63 (46%), Positives = 40/63 (63%), Frame = +1 Query: 417 DQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQ 476 D +W NPS+F R + DG V S+KVI FG+G R CIGE +AR E ++FL +++ Sbjct: 310 DPNIWKNPSKFDIYRHINKDGKF--VPSKKVIPFGIGARACIGEKLARIETYVFLTNIVK 483 Query: 477 RVE 479 R E Sbjct: 484 RFE 492 Score = 103 (36.3 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13 Identities = 21/53 (39%), Positives = 28/53 (52%), Frame = +3 Query: 351 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK 403 IG P + R LP +EAFI E FR + + H TT+D + G +IPK Sbjct: 51 IGEQAFPSVDHRKKLPLLEAFIQEIFRFKTLILLGGQHLTTKDVEINGHFIPK 209 >scf/ciona01/G126/seq_dir/hrs/G126P606529R.T0/G126P606529RH11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 177 (62.3 bits), Expect = 1.9e-12, P = 1.9e-12 Identities = 34/76 (44%), Positives = 48/76 (63%), Frame = -1 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 VF+N W +++D+K+W P F+P+R L PDG V S+ ++ FG G R C+GE +AR E Sbjct: 548 VFLNAWGLHNDEKIWETPHLFIPDRHLDPDGNF--VSSKYILPFGAGVRSCLGENLARAE 375 Query: 467 VFLFLAILLQRVEFSV 482 +FL LQ E SV Sbjct: 374 LFLVFVATLQNFELSV 327 >scf/ciona01/G126/seq_dir/hrs/G126P608782R.T0/G126P608782RC8.T0.seq 735 0 735 ABI Length = 735 Plus Strand HSPs: Score = 177 (62.3 bits), Expect = 7.4e-12, P = 7.4e-12 Identities = 43/112 (38%), Positives = 62/112 (55%), Frame = +3 Query: 342 KIQEELDTVIGRSRRP--RLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGF 399 K+ + D + RS+ +L +LP + E R VP ++PH ++ DTS+ G+ Sbjct: 369 KLNSDCDLIPDRSKLS**KLIIIFNLPSFQ----EINRMRPNVPLSVPHYSSTDTSIMGY 536 Query: 400 YIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMG 453 IPK V N W I+HD+K+W NP EF PER L G K S+KV+ F +G Sbjct: 537 RIPKATTVLTNIWGIHHDEKIWTNPYEFNPERHLDVHGNFVK--SKKVMHFNIG 692 >scf/ciona01/G126/seq_dir/hrs/G126P609056R.T0/G126P609056RH11.T0.seq 765 0 765 ABI Length = 765 Plus Strand HSPs: Score = 177 (62.3 bits), Expect = 2.5e-11, P = 2.5e-11 Identities = 45/128 (35%), Positives = 67/128 (52%), Frame = +2 Query: 342 KIQEELDTVIGRSRRP--RLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGF 399 K+ + D + RS+ +L +LP + E R VP ++PH ++ DTS+ G+ Sbjct: 380 KLNSDCDLIPDRSKLS**KLIIIFNLPSFQ----EINRMRPNVPLSVPHYSSTDTSIMGY 547 Query: 400 YIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIG 459 IPK V N W I+HD+ +W NP EF PER A V +KV R+C+G Sbjct: 548 RIPKATTVLTNIWGIHHDEXIWTNPYEFNPERASRCSWAXX-VNRKKVCTSISDWRECLG 724 Query: 460 ETIARWEVFL 469 + +A E+FL Sbjct: 725 QQLANMELFL 754 >scf/ciona01/G126/seq_dir/hrs/G126P609268F.T0/G126P609268FF8.T0.seq 717 0 717 ABI Length = 717 Minus Strand HSPs: Score = 160 (56.3 bits), Expect = 2.7e-09, P = 2.7e-09 Identities = 30/74 (40%), Positives = 47/74 (63%), Frame = -3 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 ++VN W ++++ +W P++F PER L G V S VI F +G R C+GE +AR E Sbjct: 289 IYVNLWAVHNNPDVWDEPNKFKPERHLDDKGNF--VQSNHVIPFSVGPRHCLGEQLARME 116 Query: 467 VFLFLAILLQRVEF 480 +F++L L+Q+ EF Sbjct: 115 IFIYLVSLVQKFEF 74 >scf/ciona01/G126/seq_dir/hrs/G126P608491F.T0/G126P608491FB3.T0.seq 756 0 756 ABI Length = 756 Plus Strand HSPs: Score = 152 (53.5 bits), Expect = 3.9e-08, P = 3.9e-08 Identities = 32/77 (41%), Positives = 47/77 (61%), Frame = +2 Query: 404 GRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIA 463 G+ + N W +++D +W P++F PER L DG V + VI F +G R +GE +A Sbjct: 239 GKQIAPNLWAVHNDPVVWDEPNKFKPERHLDADGNF--VQLKHVIPFSVGPRDGLGEQLA 412 Query: 464 RWEVFLFLAILLQRVEF 480 R EVF+FL L+Q+ EF Sbjct: 413 RMEVFIFLVSLVQKFEF 463 >scf/ciona01/G126/seq_dir/hrs/G126P609267F.T0/G126P609267FD8.T0.seq 731 0 731 ABI Length = 731 Plus Strand HSPs: Score = 122 (42.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07 Identities = 22/58 (37%), Positives = 33/58 (56%), Frame = +2 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 V G + P ++S +PY AFI E +R+ + VP ++ H T D + G+ IPKG V Sbjct: 194 VSGPEKIPAFENKSKMPYTSAFIQEIYRYRTLVPLSVTHMTNEDAHISGYTIPKGTTV 367 Score = 67 (23.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07 Identities = 10/24 (41%), Positives = 17/24 (70%), Frame = +2 Query: 410 NQWQINHDQKLWVNPSEFLPERFL 433 N W +++D ++W P++F PER L Sbjct: 659 NLWAVHNDPEVWDEPNKFKPERHL 730 >scf/ciona01/G126/seq_dir/hrs/G126P608339R.T0/G126P608339RE8.T0.seq 754 0 754 ABI Length = 754 Minus Strand HSPs: Score = 140 (49.3 bits), Expect = 1.1e-06, P = 1.1e-06 Identities = 33/110 (30%), Positives = 57/110 (51%), Frame = -2 Query: 38 KNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALV 97 ++PPGP G PL+G + + K+P A+ + +QQYG V +R+G V+VL + +ALV Sbjct: 417 QSPPGPRGIPLLGAITEIRKHPEHAMMKWNQQYGPVCMVRLGLKDVLVLGSYEAAHEALV 238 Query: 98 RQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSI 147 + RP + + G+ + +SG +RR N L+ + + Sbjct: 237 KN-THIADRPT-HNIEVFYGGKGILMI-NSGSFHQEQRRFGLNTLREYGM 97 >scf/ciona01/G126/seq_dir/hrs/G126P608029F.T0/G126P608029FC5.T0.seq 725 0 725 ABI Length = 725 Minus Strand HSPs: Score = 139 (48.9 bits), Expect = 1.2e-06, P = 1.2e-06 Identities = 31/66 (46%), Positives = 45/66 (68%), Frame = -3 Query: 414 INHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAI 473 I+ D+KL+ NP EF R + +G V ++K+I FG+G R C+GE +AR EVFLFLA Sbjct: 561 IHQDEKLFKNPKEFNIYRHI--EGG-KFVFNKKIIPFGIGARSCLGEKLARLEVFLFLAN 391 Query: 474 LLQRVE 479 +++R E Sbjct: 390 IIKRFE 373 >scf/ciona01/G126/seq_dir/hrs/G126P608432F.T0/G126P608432FH12.T0.seq 682 0 682 ABI Length = 682 Minus Strand HSPs: Score = 126 (44.4 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 25/77 (32%), Positives = 48/77 (62%), Frame = -1 Query: 267 KEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAI 326 +EH ++++ G IRD+ DS I + +D+ + L+D+ I+ + D+FGAG DT++T + Sbjct: 352 REHRQSYKHGVIRDLVDSFIA----ESIDKPGQL-LNDDVIMALTTDVFGAGQDTMSTTL 188 Query: 327 SWSLMYLVMNPRVQRKI 343 W +Y++ Q+K+ Sbjct: 187 QWIFVYMMRFKECQKKV 137 >scf/ciona01/G126/seq_dir/hrs/G126P609153F.T0/G126P609153FD7.T0.seq 729 0 729 ABI Length = 729 Plus Strand HSPs: Score = 126 (44.4 bits), Expect = 4.2e-05, P = 4.2e-05 Identities = 24/63 (38%), Positives = 38/63 (60%), Frame = +2 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 + N W +++D + W P F PER L +G + V+ +VI F +G R C+GE +AR E Sbjct: 470 IISNLWWVHNDPEHWDEPDVFRPERHLDTNGNL--VMLNRVIPFSIGPRNCLGENLARIE 643 Query: 467 VFL 469 ++L Sbjct: 644 IYL 652 >scf/ciona01/G126/seq_dir/hrs/G126P609254R.T0/G126P609254RB2.T0.seq 702 0 702 ABI Length = 702 Minus Strand HSPs: Score = 90 (31.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05 Identities = 18/44 (40%), Positives = 30/44 (68%), Frame = -2 Query: 299 NV-QLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQR 341 NV ++E+++ +V DLF AG DT +T I+W++++L P V R Sbjct: 368 NVGSFTEEQLVPLVRDLFMAGTDTSSTTITWAILFLASFPDVPR 237 Score = 78 (27.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05 Identities = 14/33 (42%), Positives = 22/33 (66%), Frame = -3 Query: 340 QRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFI 372 Q +I EE+DT+IG +RP +S +PY+ A + Sbjct: 241 QGRIHEEIDTIIGYHQRPSISFEDKMPYVRAVL 143 >scf/ciona01/G126/seq_dir/hrs/G126P608718R.T0/G126P608718RF10.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 125 (44.0 bits), Expect = 5.5e-05, P = 5.5e-05 Identities = 40/155 (25%), Positives = 77/155 (49%), Frame = +2 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNP--PGPWGWPLIGHMLTLGKN 58 ML+ +S+ ++ F + V+ C +++ +V G + PG G+P++G LGK+ Sbjct: 167 MLY-LSLFSSNFSIEVVLTCFCLFLLLVYNVRVRHGGTSGTLPGKDGFPIVGCFPMLGKH 343 Query: 59 PHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISN 117 L + S G + IR+G++ V+VL+G + I++AL ++ GR + ++ + Sbjct: 344 KERVLMKWSTSSLGPMFYIRLGTSKVLVLNGYNAIKEALEQKPLAIAGRVESKFVKMLFD 523 Query: 118 GQ----SMSFSPD---SGPVWAARRRLAQNGLKSFS 146 G +++ PD + VW+ NG FS Sbjct: 524 GDPGLIQLNYGPDVERTKKVWSNYIGWLXNGKAKFS 631 >scf/ciona01/G126/seq_dir/hrs/G126P604805R.T0/G126P604805RD3.T0.seq 753 0 753 ABI Length = 753 Plus Strand HSPs: Score = 122 (42.9 bits), Expect = 0.00013, P = 0.00013 Identities = 32/94 (34%), Positives = 47/94 (50%), Frame = +3 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 M I++S T F+ +V +W R PK PPGP G P G + LG +P Sbjct: 117 MFNEINVS-TSFIFLTVFLAFFYWYRR------PKNF--PPGPRGIPFFGVLPFLGNHPA 269 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + S++YG V+ +R+G VVL +TI+Q Sbjct: 270 SKMRTWSKKYGPVMSVRMGRQDWVVLGDFETIQQ 371 >scf/ciona01/G126/seq_dir/hrs/G126P608171R.T0/G126P608171RB1.T0.seq 730 0 730 ABI Length = 730 Plus Strand HSPs: Score = 118 (41.5 bits), Expect = 0.00036, P = 0.00036 Identities = 33/108 (30%), Positives = 58/108 (53%), Frame = +1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNP--PGPWGWPLIGHMLTLGKN 58 ML+ +S+ + F + V+ C +++ +V G + PG G+P++G LGK+ Sbjct: 130 MLY-LSLFFSNFSIEVVLTCFCLFLLLVYNVRVKHGGTSGTLPGKDGFPIVGCFPMLGKH 306 Query: 59 PHLALSRMS-QQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGR 106 L + S G V IR+G++ V+VL+G D I++AL ++ GR Sbjct: 307 KKKVLMKWSTSSLGPVFYIRLGTSKVLVLNGYDAIKEALEQKPLAIAGR 453 >scf/ciona01/G126/seq_dir/hrs/G126P609032F.T0/G126P609032FH11.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 116 (40.8 bits), Expect = 0.00058, P = 0.00058 Identities = 19/51 (37%), Positives = 35/51 (68%), Frame = -2 Query: 306 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRR 356 +++ + D+F AG +T T+ I W+L YL+ +P +Q K+ E+D +G++RR Sbjct: 274 QLLYFLKDIFVAGTETSTSTIIWALYYLIRHPEIQDKVHREIDAELGKARR 122 >scf/ciona01/G126/seq_dir/hrs/G126P608901F.T0/G126P608901FE8.T0.seq 736 0 736 ABI Length = 736 Minus Strand HSPs: Score = 114 (40.1 bits), Expect = 0.0010, P = 0.0010 Identities = 25/55 (45%), Positives = 33/55 (60%), Frame = -1 Query: 314 LFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYM 368 LFG+ DT +AISW L + NP VQ K +E+ V+G + R SD S LPY+ Sbjct: 214 LFGS-HDTTASAISWFLYCISQNPEVQNKCFQEITQVLGDRKNVRWSDLSSLPYL 53 >scf/ciona01/G126/seq_dir/hrs/G126P609299F.T0/G126P609299FB12.T0.seq 703 0 703 ABI Length = 703 Minus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0012, P = 0.0012 Identities = 20/53 (37%), Positives = 36/53 (67%), Frame = -2 Query: 41 PGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIR 93 P P G P+IG++ L +PH+ LS ++++GD+ +I++G +V++G D IR Sbjct: 513 PSPRGLPIIGNVHQLTTSPHVKLSEWAKEFGDLFRIKMGCFDTLVVTGYDNIR 355 >scf/ciona01/G126/seq_dir/hrs/G126P607987R.T0/G126P607987RG9.T0.seq 716 0 716 ABI Length = 716 Minus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0013, P = 0.0013 Identities = 27/81 (33%), Positives = 48/81 (59%), Frame = -3 Query: 14 LASVIFCLVF-WVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYG- 71 L +V+ L++ W+ S + PK PPGP G P++G + LGK+P LS+++ +Y Sbjct: 282 LITVLLILIYLWL---SWYRKPKNF--PPGPRGLPILGIVPYLGKHPEKVLSKLADKYNP 118 Query: 72 DVLQIRIGSTPVVVLSGLDTIRQ 94 V+ R+G ++L+ ++ I Q Sbjct: 117 SVMSFRMGRMDWIILNDIEAINQ 49 >scf/ciona01/G126/seq_dir/hrs/G126P608147F.T0/G126P608147FE10.T0.seq 723 0 723 ABI Length = 723 Minus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0013, P = 0.0013 Identities = 20/54 (37%), Positives = 39/54 (72%), Frame = -1 Query: 299 NVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 ++ L D+++++ V DLF AG +T T+ + WSL+ L+ +P +Q K+++E+ V+G Sbjct: 261 SLSL*DKQLLHYVRDLFIAGTETTTSTLRWSLLCLIHHPEIQEKLRKEILKVLG 100 >scf/ciona01/G126/seq_dir/hrs/G126P608592R.T0/G126P608592RH4.T0.seq 725 0 725 ABI Length = 725 Plus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0013, P = 0.0013 Identities = 27/81 (33%), Positives = 48/81 (59%), Frame = +1 Query: 14 LASVIFCLVF-WVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYG- 71 L +V+ L++ W+ S + PK PPGP G P++G + LGK+P LS+++ +Y Sbjct: 187 LITVLLILIYLWL---SWYRKPKNF--PPGPRGLPILGIVPYLGKHPEKVLSKLADKYNP 351 Query: 72 DVLQIRIGSTPVVVLSGLDTIRQ 94 V+ R+G ++L+ ++ I Q Sbjct: 352 SVMSFRMGRMDWIILNDIEAINQ 420 >scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P608958RE3.T0.seq 757 0 757 ABI Length = 757 Plus Strand HSPs: Score = 112 (39.4 bits), Expect = 0.0018, P = 0.0018 Identities = 26/61 (42%), Positives = 37/61 (60%), Frame = +1 Query: 434 TPDGAID--KVL-SEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDM 490 TP G I K + S VI F +G R C+G+ +A+ E+F+ L L QR F++PLG D+ Sbjct: 16 TPCGGIQFGKFIKSPXVIPFNIGTRHCLGQQLAKMELFITLTSLCQRFRFTLPLGETPDL 195 Query: 491 T 491 T Sbjct: 196 T 198 >scf/ciona01/G126/seq_dir/hrs/G126P609438F.T0/G126P609438FB4.T0.seq 709 0 709 ABI Length = 709 Plus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0047, P = 0.0047 Identities = 19/49 (38%), Positives = 35/49 (71%), Frame = +1 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 D ++++ V DLF AG +T T+ + WSL+ L+ +P +Q K+++E+ V+G Sbjct: 412 DMQLLHYVRDLFVAGTETTTSTLRWSLLCLIHDPEIQDKLRKEIFEVLG 558 >scf/ciona01/G126/seq_dir/hrs/G126P608882R.T0/G126P608882RC8.T0.seq 737 0 737 ABI Length = 737 Plus Strand HSPs: Score = 105 (37.0 bits), Expect = 0.011, P = 0.011 Identities = 27/67 (40%), Positives = 40/67 (59%), Frame = +2 Query: 445 EKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPIYGLTMKHACC- 503 E VI F +G R C+GE +AR EVF+FL L+Q+ EF +P +V++ I + C Sbjct: 47 EHVIPFSVGPRHCLGEQLARMEVFIFLVSLVQKFEF-LPDPDEVNLPDIENGSYGPLCAP 223 Query: 504 EHFQMQLR 511 + F+M R Sbjct: 224 KPFKMVAR 247 >scf/ciona01/G126/seq_dir/hrs/G126P608958R.T0/G126P608958RA3.T0.seq 764 0 764 ABI Length = 764 Plus Strand HSPs: Score = 104 (36.6 bits), Expect = 0.015, P = 0.015 Identities = 20/50 (40%), Positives = 31/50 (62%), Frame = +2 Query: 442 VLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMT 491 + S V F +G R C+G+ +A+ E+F+ L L QR F++PLG D+T Sbjct: 59 IKSPXVFPFNIGTRHCLGQQLAKMELFITLTSLCQRFRFTLPLGETPDLT 208 >scf/ciona01/G126/seq_dir/hrs/G126P606393F.T0/G126P606393FH8.T0.seq 727 0 727 ABI Length = 727 Minus Strand HSPs: Score = 99 (34.8 bits), Expect = 0.051, P = 0.050 Identities = 19/51 (37%), Positives = 31/51 (60%), Frame = -1 Query: 353 RSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK 403 + R + S +++LPY +A + ET+R + P IP T D +L G++IPK Sbjct: 304 KGRDGKSSLKTNLPYTKAVLQETYRIRTVTPLAIPRRTRGDVNLMGYFIPK 152 >scf/ciona01/G126/seq_dir/hrs/G126P608373R.T0/G126P608373RA8.T0.seq 747 0 747 ABI Length = 747 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.069, P = 0.066 Identities = 26/77 (33%), Positives = 39/77 (50%), Frame = +1 Query: 429 PERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKV 488 P+R + DG V S ++ F +G R C+GE IA+ E+F+F+ LLQ F+V Sbjct: 37 PQRHIDIDGNF--VPSHNILPFSVGSRYCMGEKIAKTEIFIFIVSLLQN--FTVHRDPSF 204 Query: 489 DM-TPIYGLTMKHACCEH 505 + + M CC H Sbjct: 205 QWPSEMEEGVMSALCCPH 258 >scf/ciona01/G126/seq_dir/hrs/G126P609292F.T0/G126P609292FE4.T0.seq 1056 0 1056 ABI Length = 1056 Minus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.15, P = 0.14 Identities = 18/56 (32%), Positives = 35/56 (62%), Frame = -1 Query: 38 KNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIR 93 ++ P P G P+IG++ L +P + S ++++GD+ +I++G +V +G D IR Sbjct: 534 RDXPSPRGLPIIGNVHQLTTSPQVKPSEWAKEFGDLFRIKMGCFDTLVXTGYDKIR 367 >scf/ciona01/G126/seq_dir/hrs/G126P608763F.T0/G126P608763FB9.T0.seq 719 0 719 ABI Length = 719 Minus Strand HSPs: Score = 94 (33.1 bits), Expect = 0.18, P = 0.17 Identities = 26/83 (31%), Positives = 40/83 (48%), Frame = -1 Query: 12 FLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYG 71 ++ +V L +W R PK P GP G P +G + LG + + S +YG Sbjct: 716 YIFLTVXLGLYYWYRR------PKNF--PXGPRGIPFLGVLPFLGNYHERKMRKWSNKYG 561 Query: 72 DVLQIRIGSTPVVVLSGLDTIRQ 94 V+ +R+G VVL +TI+Q Sbjct: 560 PVMSVRMGRQDWVVLGDHETIQQ 492 >scf/ciona01/G126/seq_dir/hrs/G126P608824R.T0/G126P608824RB6.T0.seq 735 0 735 ABI Length = 735 Minus Strand HSPs: Score = 86 (30.3 bits), Expect = 0.22, Sum P(2) = 0.20 Identities = 15/43 (34%), Positives = 24/43 (55%), Frame = -2 Query: 391 TRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFL 433 + D L G+ +PKG + + I+H +LW + F P+RFL Sbjct: 713 SEDCKLXGYSVPKGTQAIIFGYTIHHPSRLWEDEERFEPDRFL 585 Score = 47 (16.5 bits), Expect = 0.22, Sum P(2) = 0.20 Identities = 12/28 (42%), Positives = 14/28 (50%), Frame = -3 Query: 448 IIFGMGKRKCIGETIARWEVFLFLAILL 475 I F G R CIG+ A E + L LL Sbjct: 547 IPFSAGPRNCIGQKFAMMEEKVVLCHLL 464 >scf/ciona01/G126/seq_dir/hrs/G126P608309F.T0/G126P608309FD6.T0.seq 730 0 730 ABI Length = 730 Plus Strand HSPs: Score = 90 (31.7 bits), Expect = 0.53, P = 0.41 Identities = 25/81 (30%), Positives = 42/81 (51%), Frame = +1 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 M+ I + + + L S I + V+ + P G PPGP G P++G + L K P Sbjct: 277 MILEIIRNVSTYTLLSTILAISAAVLYQYWWRRPNGF--PPGPRGIPILGIIPFLDKFPE 450 Query: 61 LALSRMS-QQYGDVLQIRIGST 81 L + S ++YG V+ R+G++ Sbjct: 451 KLLKKWSLEKYGAVMSARLGTS 516 >scf/ciona01/G126/seq_dir/hrs/G126P608154R.T0/G126P608154RF4.T0.seq 722 0 722 ABI Length = 722 Minus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.68, P = 0.49 Identities = 19/66 (28%), Positives = 35/66 (53%), Frame = -2 Query: 286 IEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQE 345 + H Q + AN L ++ ++ D+ AG T ++ W +++++ NP K+Q Sbjct: 568 VNHSQVQPXPSLANKTL----LVALIQDMLFAGSITTSSEFLWVIIFVLKNPNCMHKLQA 401 Query: 346 ELDTVI 351 ELDTV+ Sbjct: 400 ELDTVL 383 >scf/ciona01/G126/seq_dir/hrs/G126P608103R.T0/G126P608103RA11.T0.seq 703 0 703 ABI Length = 703 Minus Strand HSPs: Score = 67 (23.6 bits), Expect = 2.0, Sum P(2) = 0.87 Identities = 19/50 (38%), Positives = 29/50 (58%), Frame = -1 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLV--MNPRVQRKIQEELDTVIG 352 D +++ V DLF AG +T +S L Y V PR Q K+++E+ V+G Sbjct: 652 DTQLLQYVRDLFVAGTETNNEXLSDGL-YSV*FTTPRHQEKLRKEIFEVLG 503 Score = 58 (20.4 bits), Expect = 2.0, Sum P(2) = 0.87 Identities = 11/29 (37%), Positives = 17/29 (58%), Frame = -2 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFRH 378 V G + P ++S +PY AFI E +R+ Sbjct: 135 VSGPEKIPAFENKSKMPYTSAFIQEIYRY 49 >scf/ciona01/G126/seq_dir/hrs/G126P607984F.T0/G126P607984FD9.T0.seq 708 0 708 ABI Length = 708 Plus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.4, P = 0.91 Identities = 15/32 (46%), Positives = 23/32 (71%), Frame = +1 Query: 446 KVIIFGMGKRKCIGETIARWEVFLFLAILLQR 477 +VI F +G C+GE +AR E++LFL +LQ+ Sbjct: 37 RVIPFSIGPXNCLGENLARIEIYLFLVSILQK 132 >scf/ciona01/G126/seq_dir/hrs/G126P608816R.T0/G126P608816RH8.T0.seq 726 0 726 ABI Length = 726 Minus Strand HSPs: Score = 84 (29.6 bits), Expect = 2.5, P = 0.92 Identities = 15/44 (34%), Positives = 29/44 (65%), Frame = -3 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEEL 347 + +++ ++DLF AG +T TT + WS++ L+ P +Q + +EL Sbjct: 319 ERQLVQSLVDLFLAGIETTTTFLLWSMITLLHYPDIQALLYQEL 188 >scf/ciona01/G126/seq_dir/hrs/G126P608847F.T0/G126P608847FC2.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 83 (29.2 bits), Expect = 3.2, P = 0.96 Identities = 16/51 (31%), Positives = 26/51 (50%), Frame = +1 Query: 357 PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 P + +LP ++AFI E +R + P + + T D + G +IPK V Sbjct: 265 PSVKHGDNLPLLQAFIQELYRCITIAPLGLQRTNTEDVEIGGHFIPKNTVV 417 >scf/ciona01/G126/seq_dir/hrs/G126P608944R.T0/G126P608944RG3.T0.seq 718 0 718 ABI Length = 718 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.1, P = 0.98 Identities = 23/78 (29%), Positives = 39/78 (50%), Frame = +2 Query: 307 IINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLP 366 +++ + DLF AG +T TT + W ++ ++ P +Q +I EL IG + + Sbjct: 92 LLHSISDLFIAGTETTTTTLLWCMIAMLHYPDLQARIYNELMQEIG*NM---------IR 244 Query: 367 YMEAFILETFRHSSFVPF 384 YM+ I E F FV + Sbjct: 245 YMQRLIEERFELGCFVQY 298 >scf/ciona01/G126/seq_dir/hrs/G126P608877F.T0/G126P608877FB3.T0.seq 714 0 714 ABI Length = 714 Minus Strand HSPs: Score = 65 (22.9 bits), Expect = 6.8, Sum P(2) = 1.00 Identities = 10/51 (19%), Positives = 30/51 (58%), Frame = -1 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 ++++ I+ D+ AG ++ + ++ W + L+ +P + + E+D +G++ Sbjct: 300 EDELRTIIQDMMFAGSESTSNSLLWCFVILLHHPDHAKTLVNEIDMAMGKT 148 Score = 55 (19.4 bits), Expect = 6.8, Sum P(2) = 1.00 Identities = 10/30 (33%), Positives = 18/30 (60%), Frame = -2 Query: 261 FMQKMVKEHYKTFEKGHIRDITDSLIEHCQ 290 F + ++EH K+F++ +RD D+ I Q Sbjct: 554 FARGHIEEHKKSFDENCLRDFIDNYIHEMQ 465 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.139 0.426 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 512 512 10. 74 3 13 22 0.065 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_22.seq Title: /seqs/databases/ciona/ciona_22.seq Release date: unknown Posted date: 3:07 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 78,616,084 # of sequences in database: 100,000 # of database sequences satisfying E: 40 No. of states in DFA: 554 (59 KB) Total size of DFA: 108 KB (128 KB) Time to generate neighborhood: 0.01u 0.00s 0.01t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.95u 0.15s 14.10t Elapsed: 00:00:22 Total cpu time: 13.99u 0.16s 14.15t Elapsed: 00:00:22 Start: Mon Apr 1 21:42:50 2002 End: Mon Apr 1 21:43:12 2002