TBLASTN 2.0a19MP-WashU [14-Jul-1998] [Build linux-x86 18:51:45 30-Jul-1998] Reference: Gish, Warren (1994-1997). unpublished. Altschul, Stephen F., Warren Gish, Webb Miller, Eugene W. Myers, and David J. Lipman (1990). Basic local alignment search tool. J. Mol. Biol. 215:403-10. Notice: statistical significance is estimated under the assumption that the equivalent of one complete reading frame of the database codes for protein and that significant alignments will involve only coding reading frames. Query= 1_CYP1A1_NM_000499 (512 letters) Database: /seqs/databases/ciona/ciona_00.seq 99,999 sequences; 77,897,945 total letters. Searching....10....20....30....40....50....60....70....80....90....100% done Smallest Sum Reading High Probability Sequences producing High-scoring Segment Pairs: Frame Score P(N) N scf/ciona01/G126/seq_dir/hrs/G126P64785F.T0/G126P64785... +2 369 1.0e-33 1 scf/ciona01/G126/seq_dir/hrs/G126P64754F.T0/G126P64754... -2 277 2.2e-23 1 scf/ciona01/G126/seq_dir/hrs/G126P64646F.T0/G126P64646... +2 231 1.1e-21 2 scf/ciona01/G126/seq_dir/hrs/G126P63984R.T0/G126P63984... -2 227 6.9e-18 1 scf/ciona01/G126/seq_dir/hrs/G126P63026F.T0/G126P63026... -3 159 9.2e-15 2 scf/ciona01/G126/seq_dir/hrs/G126P64486F.T0/G126P64486... +2 186 1.9e-13 1 scf/ciona01/G126/seq_dir/hrs/G126P64000F.T0/G126P64000... -3 122 2.3e-11 2 chromat_dir/hrs/G126P60066R.T0/G126P60066RH5.T0.scf -1 161 2.4e-09 1 scf/ciona01/G126/seq_dir/hrs/G126P64004F.T0/G126P64004... +1 157 8.6e-09 1 chromat_dir/hrs/G126P60601R.T0/G126P60601RD10.T0.scf +3 137 1.2e-08 2 chromat_dir/hrs/G126P60606R.T0/G126P60606RB4.T0.scf +1 155 1.7e-08 1 scf/ciona01/G126/seq_dir/hrs/G126P64563R.T0/G126P64563... +2 116 2.0e-08 2 scf/ciona01/G126/seq_dir/hrs/G126P64785F.T0/G126P64785... -1 147 1.4e-07 1 chromat_dir/hrs/G126P60145F.T0/G126P60145FG8.T0.scf -2 99 1.6e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P63966F.T0/G126P63966... +2 136 4.2e-07 2 scf/ciona01/G126/seq_dir/hrs/G126P64476F.T0/G126P64476... -2 138 1.7e-06 1 chromat_dir/hrs/G126P60515R.T0/G126P60515RG6.T0.scf +2 91 1.7e-06 3 scf/ciona01/G126/seq_dir/hrs/G126P64700R.T0/G126P64700... -3 137 2.1e-06 1 scf/ciona01/G126/seq_dir/hrs/G126P64123F.T0/G126P64123... +2 95 1.1e-05 2 scf/ciona01/G126/seq_dir/hrs/G126P64618F.T0/G126P64618... +2 127 3.3e-05 1 chromat_dir/hrs/G126P60614F.T0/G126P60614FG3.T0.scf -1 127 3.5e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P61654R.T0/G126P61654... +3 127 3.5e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P64672F.T0/G126P64672... -3 127 3.6e-05 1 scf/ciona01/G126/seq_dir/hrs/G126P63977F.T0/G126P63977... -1 101 4.6e-05 2 chromat_dir/hrs/G126P60246F.T0/G126P60246FC8.T0.scf -2 115 0.00010 2 chromat_dir/hrs/G126P6018F.T0/G126P6018FH8.T0.scf -1 119 0.00026 1 scf/ciona01/G126/seq_dir/hrs/G126P60866F.T0/G126P60866... +2 113 0.0013 1 chromat_dir/hrs/G126P60021F.T0/G126P60021FE1.T0.scf +3 113 0.0014 1 scf/ciona01/G126/seq_dir/hrs/G126P61537F.T0/G126P61537... -3 111 0.0021 1 chromat_dir/hrs/G126P60080R.T0/G126P60080RC3.T0.scf +3 96 0.0024 2 scf/ciona01/G126/seq_dir/hrs/G126P64409F.T0/G126P64409... +3 108 0.0050 1 scf/ciona01/G126/seq_dir/hrs/G126P64027F.T0/G126P64027... -2 107 0.0066 1 scf/ciona01/G126/seq_dir/hrs/G126P64029F.T0/G126P64029... -3 106 0.0081 1 scf/ciona01/G126/seq_dir/hrs/G126P64003F.T0/G126P64003... -2 101 0.031 1 scf/ciona01/G126/seq_dir/hrs/G126P64616F.T0/G126P64616... +1 98 0.065 1 scf/ciona01/G126/seq_dir/hrs/G126P61625R.T0/G126P61625... +2 97 0.081 1 scf/ciona01/G126/seq_dir/hrs/G126P64016R.T0/G126P64016... -3 97 0.083 1 scf/ciona01/G126/seq_dir/hrs/G126P64056F.T0/G126P64056... +2 97 0.085 1 chromat_dir/hrs/G126P60606F.T0/G126P60606FB4.T0.scf +1 72 0.096 2 scf/ciona01/G126/seq_dir/hrs/G126P64022F.T0/G126P64022... +2 96 0.11 1 scf/ciona01/G126/seq_dir/hrs/G126P63965F.T0/G126P63965... +2 95 0.13 1 scf/ciona01/G126/seq_dir/hrs/G126P64410F.T0/G126P64410... +3 95 0.14 1 scf/ciona01/G126/seq_dir/hrs/G126P64789F.T0/G126P64789... -1 93 0.22 1 scf/ciona01/G126/seq_dir/hrs/G126P63017F.T0/G126P63017... +1 91 0.33 1 scf/ciona01/G126/seq_dir/hrs/G126P64609R.T0/G126P64609... +3 91 0.34 1 scf/ciona01/G126/seq_dir/hrs/G126P64401F.T0/G126P64401... -1 89 0.49 1 scf/ciona01/G126/seq_dir/hrs/G126P64523F.T0/G126P64523... +3 89 0.49 1 scf/ciona01/G126/seq_dir/hrs/G126P61625F.T0/G126P61625... -3 88 0.57 1 scf/ciona01/G126/seq_dir/hrs/G126P64515F.T0/G126P64515... -3 87 0.70 1 scf/ciona01/G126/seq_dir/hrs/G126P64537F.T0/G126P64537... -1 86 0.79 1 scf/ciona01/G126/seq_dir/hrs/G126P64657F.T0/G126P64657... +3 82 0.99 1 chromat_dir/hrs/G126P6005F.T0/G126P6005FG5.T0.scf +2 68 0.998 2 scf/ciona01/G126/seq_dir/hrs/G126P64716F.T0/G126P64716... -1 81 0.999 1 scf/ciona01/G126/seq_dir/hrs/G126P64020F.T0/G126P64020... +3 80 0.999 1 >scf/ciona01/G126/seq_dir/hrs/G126P64785F.T0/G126P64785FE10.T0.seq 725 0 725 ABI Length = 725 Plus Strand HSPs: Score = 369 (129.9 bits), Expect = 1.0e-33, P = 1.0e-33 Identities = 80/231 (34%), Positives = 132/231 (57%), Frame = +2 Query: 259 YSFMQKMVKEHYKTFEKGHIRDITDS-LIEHCQEKQLDENANVQLSDEKIINIVLDLFGA 317 + ++K ++ H +T +KG RD D+ LI Q+K+ EN++ +DE+++ + DLF Sbjct: 44 HDLLRKYIQMHKETLDKGSPRDFIDAFLIAGEQDKE--ENSS--FNDEQLLFYIQDLFFG 211 Query: 318 GFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFR 377 G DT + ++W+ +YL + P Q+++ +E+D VIG S +S +PY +A + E FR Sbjct: 212 GTDTTSFTLTWTFLYLSLFPEKQKRLHDEIDEVIGSSGNISMSFLEKMPYAQAVMQEIFR 391 Query: 378 HSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDG 437 VP +P ++ SL G +PK V N W +H+ W P FLPER + +G Sbjct: 392 VRPLVPLGMPRKCGQNISLMGHNLPKDTSVIPNIWSAHHNPDRWPEPDSFLPERHIDSNG 571 Query: 438 AIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGV-KVD 489 K S+ +I F +G R C+G +A E F+F+ LL +++F++P G KVD Sbjct: 572 NFIK--SKDIIPFMLGPRNCLGIKLAEMEHFMFMVGLLHKLQFALPAGQEKVD 724 >scf/ciona01/G126/seq_dir/hrs/G126P64754F.T0/G126P64754FF5.T0.seq 754 0 754 ABI Length = 754 Minus Strand HSPs: Score = 277 (97.5 bits), Expect = 2.2e-23, P = 2.2e-23 Identities = 60/168 (35%), Positives = 92/168 (54%), Frame = -2 Query: 295 DENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 DE A+ + ++ + V +LF G DT TA+ W+L+ + NP + +K++ E+D + + Sbjct: 534 DETAS-WWNKYQLFHYVKELFLGGTDTTATALRWALLLIHTNPEIAKKLKAEIDNNV--T 364 Query: 355 RRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQI 414 R +L D +LPY +A I E FR+ V F T+ + G+ IPKG V N W + Sbjct: 363 GRVKLDDMINLPYTQAVIQEVFRYRPVVNFGTMRKTSAVGTATGYRIPKGTIVMPNIWSV 184 Query: 415 NHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETI 462 +HD W NP F PER L +G K S+ VI F +G+R C+G + Sbjct: 183 HHDPVRWKNPEVFRPERHLDENGKFKK--SDAVIPFNVGQRSCLGRQL 46 >scf/ciona01/G126/seq_dir/hrs/G126P64646F.T0/G126P64646FF12.T0.seq 831 0 831 ABI Length = 831 Plus Strand HSPs: Score = 231 (81.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21 Identities = 51/144 (35%), Positives = 75/144 (52%), Frame = +2 Query: 337 PRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSL 396 PR K+ E+ V G +S +PY A + E+ R P ++ H T D ++ Sbjct: 80 PRN*NKMAAEIIKVTGNDVI-NVSMMESMPYTRAVMYESTRMRPVFPLSLGHQATSDVTV 256 Query: 397 KGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRK 456 K IPKG V N W I +D K W NP F PER +T +G K +EK++ F +G R Sbjct: 257 KDNVIPKGTLVVANLWAIQNDPKWWKNPESFRPERHITENGGFTK--NEKIVPFSIGPRF 430 Query: 457 CIGETIARWEVFLFLAILLQRVEF 480 C+G +A + F+FLA L++ +F Sbjct: 431 CLGSQMATYHQFIFLANLVRTFKF 502 Score = 53 (18.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21 Identities = 8/22 (36%), Positives = 15/22 (68%), Frame = +3 Query: 326 ISWSLMYLVMNPRVQRKIQEEL 347 + WSL++L NP ++ K + +L Sbjct: 48 VHWSLVFLAQNPEIKTKWRRKL 113 >scf/ciona01/G126/seq_dir/hrs/G126P63984R.T0/G126P63984RE6.T0.seq 728 0 728 ABI Length = 728 Minus Strand HSPs: Score = 227 (79.9 bits), Expect = 6.9e-18, P = 6.9e-18 Identities = 52/139 (37%), Positives = 74/139 (53%), Frame = -2 Query: 361 DRSHLPYMEAFILETFRHSSFVPFTI-PHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQK 419 D +PY A + E FR S +PF I TT + L G+ IP G V N W ++HD Sbjct: 547 DECRMPYTRAVMQEVFRFRSALPFNIIARKTTSELKLNGYKIPAGMPVIANLWSVHHDSV 368 Query: 420 LWV-NPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRV 478 W +P F PER L DG V S VI F +G R CIG +A+ E+F+F+ +L+R Sbjct: 367 TWAPDPEIFRPERHLDDDGNF--VPSNHVIPFSVGARSCIGRNLAKNELFVFITSILRRF 194 Query: 479 EFSVPLGVKV-DMTPIYGLTM 498 + + G V D++ G+ + Sbjct: 193 DLELADGCHVGDISGDSGMLL 131 >scf/ciona01/G126/seq_dir/hrs/G126P63026F.T0/G126P63026FH7.T0.seq 754 0 754 ABI Length = 754 Minus Strand HSPs: Score = 159 (56.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15 Identities = 32/71 (45%), Positives = 44/71 (61%), Frame = -3 Query: 410 NQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFL 469 N W +++D +W PS+F PER L G V S VI F +G R C+GE +AR EVF+ Sbjct: 557 NLWAVHNDPDVWNEPSKFKPERHLDDKGNF--VQSSHVIPFSVGPRHCLGEQLARMEVFI 384 Query: 470 FLAILLQRVEF 480 +L L+Q+ EF Sbjct: 383 YLVSLVQKFEF 351 Score = 91 (32.0 bits), Expect = 9.2e-15, Sum P(2) = 9.2e-15 Identities = 18/46 (39%), Positives = 26/46 (56%), Frame = -1 Query: 364 HLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFV 409 ++PY AF+ E +R+ + VP + H T D L + IPKG V V Sbjct: 754 NIPYTCAFMQEVYRNRTLVPLNLTHMTNEDVILNEYSIPKGTTVRV 617 >scf/ciona01/G126/seq_dir/hrs/G126P64486F.T0/G126P64486FC2.T0.seq 752 0 752 ABI Length = 752 Plus Strand HSPs: Score = 186 (65.5 bits), Expect = 1.9e-13, P = 1.9e-13 Identities = 47/147 (31%), Positives = 74/147 (50%), Frame = +2 Query: 295 DENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 DE A+ + ++ + V +LF G DT TA+ W+L+ + P + +K++ E+DT + + Sbjct: 281 DETAS-WWNKYQLFHYVKELFLGGTDTTATALRWALLLIHTYPEIAKKLKAEIDTNV--T 451 Query: 355 RRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQI 414 R +L D +LPY +A I E FR+ V F T+ + G+ IPKG V N W Sbjct: 452 GRVKLDDMINLPYTQAVIQEVFRYRPVVNFGTMRKTSAVGTAAGYRIPKGTIVMPNIWVG 631 Query: 415 NHDQKLWVNPSEFLPERFLTPDGAIDK 441 + N F PER + +G K Sbjct: 632 SPRPCTLENRRVFRPERHIDENGIFKK 712 >scf/ciona01/G126/seq_dir/hrs/G126P64000F.T0/G126P64000FE7.T0.seq 755 0 755 ABI Length = 755 Minus Strand HSPs: Score = 122 (42.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11 Identities = 21/58 (36%), Positives = 35/58 (60%), Frame = -3 Query: 350 VIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 V G+ + P + ++S++PY AF+ E +R+ + PF + H T D +L G+ IP G V Sbjct: 324 VTGQEKIPAVDNKSYMPYTCAFMQEVYRYRTLAPFGVAHMTNEDVNLNGYSIPNGTTV 151 Score = 104 (36.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11 Identities = 17/50 (34%), Positives = 37/50 (74%), Frame = -1 Query: 304 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR 353 D+++++ V DLF AG +T T+ + W+L+ L+ +P+ Q ++++E+ V+G+ Sbjct: 530 DKQLLHYVRDLFFAGSETSTSTLRWTLLCLIHHPKKQERLRKEIFEVLGK 381 >chromat_dir/hrs/G126P60066R.T0/G126P60066RH5.T0.scf Length = 734 Minus Strand HSPs: Score = 161 (56.7 bits), Expect = 2.4e-09, P = 2.4e-09 Identities = 33/79 (41%), Positives = 50/79 (63%), Frame = -1 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 V+ N W ++D +W NPS+F P R + D A + + S VI F +G R CIGE +A+ E Sbjct: 650 VYSNIWGAHNDPVVWPNPSKFDPYRHI--DKAGNFIPSNNVIPFSVGNRNCIGEQLAKQE 477 Query: 467 VFLFLAILLQRVEFSVPLG 485 +F+F+ +LQ+ E +VP G Sbjct: 476 IFIFVTKILQKFELTVPPG 420 >scf/ciona01/G126/seq_dir/hrs/G126P64004F.T0/G126P64004FA4.T0.seq 740 0 740 ABI Length = 740 Plus Strand HSPs: Score = 157 (55.3 bits), Expect = 8.6e-09, P = 8.6e-09 Identities = 31/77 (40%), Positives = 47/77 (61%), Frame = +1 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 V+ N W ++D W +PS F P R + DG + +LS +I F +G R C GE +AR E Sbjct: 373 VYANIWGAHNDPVAWPDPSRFDPYRHIDKDG--NCILSNNIIPFSVGLRSCPGEQLARQE 546 Query: 467 VFLFLAILLQRVEFSVP 483 +F+F+ +LQ+ + SVP Sbjct: 547 IFIFVTKILQKFKLSVP 597 >chromat_dir/hrs/G126P60601R.T0/G126P60601RD10.T0.scf Length = 732 Plus Strand HSPs: Score = 137 (48.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08 Identities = 28/61 (45%), Positives = 41/61 (67%), Frame = +3 Query: 417 DQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQ 476 D +W +PS+F R + DG +LS KVI FG+G R C+GE +AR E++LFLA +++ Sbjct: 534 DLNVWKDPSKFDIYRHIDKDGKF--ILSRKVIPFGIGARSCLGEKLARIEIYLFLANIIK 707 Query: 477 R 477 R Sbjct: 708 R 710 Score = 59 (20.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08 Identities = 14/37 (37%), Positives = 20/37 (54%), Frame = +2 Query: 386 IPHSTTRDTSLKGFYIPKGRCV-FVNQWQINHDQKLWV 422 I H TT+D +KG+ IPK V + N + K W+ Sbjct: 107 IQHLTTKDVDIKGYRIPKDTKV*YTNDRNV---MKAWL 211 >chromat_dir/hrs/G126P60606R.T0/G126P60606RB4.T0.scf Length = 753 Plus Strand HSPs: Score = 155 (54.6 bits), Expect = 1.7e-08, P = 1.7e-08 Identities = 30/74 (40%), Positives = 46/74 (62%), Frame = +1 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 +FVN W ++++ +W P++F PER L G V S VI F +G R C+GE +AR E Sbjct: 472 IFVNLWAVHNNPDVWDEPNKFKPERHLDDKGNF--VQSNHVIPFSVGPRHCLGEKLARME 645 Query: 467 VFLFLAILLQRVEF 480 VF++L L+ ++ F Sbjct: 646 VFIYLVSLVPKLNF 687 >scf/ciona01/G126/seq_dir/hrs/G126P64563R.T0/G126P64563RE12.T0.seq 741 0 741 ABI Length = 741 Plus Strand HSPs: Score = 116 (40.8 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08 Identities = 21/58 (36%), Positives = 38/58 (65%), Frame = +2 Query: 296 ENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR 353 E N+ L DE+++ ++ DL AG +T + I+W L+ L+ NP+ +++ E+D V+GR Sbjct: 29 EILNLLLQDEELVVVLRDLLSAGSETSSNTITWMLILLLHNPKHMQRVVNEIDDVMGR 202 Score = 82 (28.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08 Identities = 18/59 (30%), Positives = 29/59 (49%), Frame = +2 Query: 349 TVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 ++ G + P + +P+ A I ET R + VP + H T ++G+ IPKG V Sbjct: 266 SISGPNGVPGSCHKDKMPFTCAVIQETMRCKTVVPTAVQHCATATLEVEGYIIPKGTLV 442 >scf/ciona01/G126/seq_dir/hrs/G126P64785F.T0/G126P64785FC9.T0.seq 733 0 733 ABI Length = 733 Minus Strand HSPs: Score = 147 (51.7 bits), Expect = 1.4e-07, P = 1.4e-07 Identities = 35/103 (33%), Positives = 55/103 (53%), Frame = -1 Query: 41 PGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YGDVLQIRIGSTPVVVLSGLDTIRQALVRQ 99 PG G+PL+G LGK+ L + S G V R+G++ V+VL+G D I++ALV++ Sbjct: 703 PGKDGFPLVGCFPMLGKHKERMLMKWSSSGLGPVFYTRLGASRVLVLNGYDVIKEALVQR 524 Query: 100 GDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGL 142 GR + + +G+ D GP+W +R+ QN L Sbjct: 523 PLAMAGRVETELIQELYDGKHGLIQLDHGPLWKEQRKFGQNTL 395 >chromat_dir/hrs/G126P60145F.T0/G126P60145FG8.T0.scf Length = 748 Minus Strand HSPs: Score = 99 (34.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07 Identities = 18/45 (40%), Positives = 28/45 (62%), Frame = -2 Query: 342 KIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTI 386 K+Q+E+D ++G + P+ DR +PY EA ILE R ++ P I Sbjct: 291 KVQQEIDNILGLDQVPKYEDRMKMPYCEATILEVQRFATIAPIGI 157 Score = 93 (32.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07 Identities = 14/30 (46%), Positives = 24/30 (80%), Frame = -1 Query: 311 VLDLFGAGFDTVTTAISWSLMYLVMNPRVQ 340 ++DLF AG +T +T +SW+++Y+V NP +Q Sbjct: 445 IMDLFQAGTETTSTTLSWAVLYMVNNPEIQ 356 >scf/ciona01/G126/seq_dir/hrs/G126P63966F.T0/G126P63966FH12.T0.seq 726 0 726 ABI Length = 726 Plus Strand HSPs: Score = 136 (47.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07 Identities = 24/55 (43%), Positives = 35/55 (63%), Frame = +2 Query: 351 IGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGR 405 +G S RP +S ++ +PYM AFI E FR + VP +PH TT + + G+ IPK + Sbjct: 494 LGSSARPSMSHKTDMPYMCAFIQEVFRFRTLVPLNVPHKTTEKSHINGYTIPKSQ 658 Score = 45 (15.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07 Identities = 10/23 (43%), Positives = 17/23 (73%), Frame = +2 Query: 331 MYLVMNPRVQRKIQEELDTVIGR 353 +Y+ ++ R RKI+EE+ VIG+ Sbjct: 71 LYVALS-RNPRKIREEIMNVIGK 136 >scf/ciona01/G126/seq_dir/hrs/G126P64476F.T0/G126P64476FC1.T0.seq 740 0 740 ABI Length = 740 Minus Strand HSPs: Score = 138 (48.6 bits), Expect = 1.7e-06, P = 1.7e-06 Identities = 29/66 (43%), Positives = 44/66 (66%), Frame = -2 Query: 413 QINHDQKLWVNPSEFLPERFLTPDGAIDKVLSE---KVIIFGMGKRKCIGETIARWEVFL 469 Q + D K+W NP EF P FL DG+ K+ SE K++ +G GKR+C G ++R E+F+ Sbjct: 571 QAHKDPKIWKNPDEFDPGHFLEEDGS--KLRSEAVHKLLSWGAGKRRCPGAELSRHEIFV 398 Query: 470 FLAILLQR 477 F+ L++R Sbjct: 397 FVTTLVRR 374 >chromat_dir/hrs/G126P60515R.T0/G126P60515RG6.T0.scf Length = 774 Plus Strand HSPs: Score = 91 (32.0 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06 Identities = 18/54 (33%), Positives = 33/54 (61%), Frame = +2 Query: 299 NVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 ++ +++++ V DLF AG DT + ISW++ L+ P +Q K+ EE+ + G Sbjct: 335 DILFQNDELLQCVADLFLAGTDTSSNTISWAVSVLLHFPDLQTKLFEEISSKTG 496 Score = 86 (30.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06 Identities = 16/47 (34%), Positives = 24/47 (51%), Frame = +3 Query: 357 PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPK 403 P + R LP ++AFI E R S P ++ H + D + +IPK Sbjct: 576 PAVEHRQELPLLQAFIQEILRCFSIAPLSLQHKASEDVEIGRMFIPK 716 Score = 42 (14.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06 Identities = 9/31 (29%), Positives = 16/31 (51%), Frame = +2 Query: 258 FYSFMQKMVKEHYKTFEKGHIRDITDS-LIE 287 F F + ++EH + ++ D D+ LIE Sbjct: 140 FAEFCRAQIEEHQRNLDENEPTDFIDAFLIE 232 >scf/ciona01/G126/seq_dir/hrs/G126P64700R.T0/G126P64700RH12.T0.seq 727 0 727 ABI Length = 727 Minus Strand HSPs: Score = 137 (48.2 bits), Expect = 2.1e-06, P = 2.1e-06 Identities = 30/86 (34%), Positives = 50/86 (58%), Frame = -3 Query: 13 LLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGD 72 LL +++F L W I R + +PPGP G PL+G + LGK+P A+ + +QQYG Sbjct: 284 LLLAIVFYLT-WHIWNRRSPL-----SPPGPRGIPLLGAITQLGKHPEHAMMKWNQQYGP 123 Query: 73 VLQIRIGSTPVVVLSGLDTIRQALVR 98 + +R+G V++L + +AL++ Sbjct: 122 ICMVRLGHKDVLLLGSYEAAHEALLK 45 >scf/ciona01/G126/seq_dir/hrs/G126P64123F.T0/G126P64123FG2.T0.seq 710 0 710 ABI Length = 710 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05 Identities = 17/53 (32%), Positives = 36/53 (67%), Frame = +2 Query: 302 LSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 354 LS+ +++ ++DLF AG +T +W+++ ++ NP+V+ K++ EL+ G+S Sbjct: 50 LSENQLLYYIVDLFLAGTETSANTNAWAILLVLKNPQVKAKLRSELEA-FGKS 205 Score = 79 (27.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05 Identities = 16/43 (37%), Positives = 23/43 (53%), Frame = +2 Query: 361 DRSHLPYMEAFILETFRHSSFVPFTI-PHSTTRDTSLKGFYIP 402 D + +PY A + E FR+ + P I TT D LKG+ +P Sbjct: 563 DEAKMPYTRAVMQEVFRYRTSAPLNIVARRTTSDLELKGYKVP 691 >scf/ciona01/G126/seq_dir/hrs/G126P64618F.T0/G126P64618FD10.T0.seq 740 0 740 ABI Length = 740 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 3.3e-05, P = 3.3e-05 Identities = 34/94 (36%), Positives = 49/94 (52%), Frame = +2 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 ML I++S T F+ +V L +W R PK PPGP G P +G + LG P Sbjct: 224 MLNEINVS-TSFIFLTVFLGLYYWYRR------PKNF--PPGPRGIPFLGVLPFLGNYPE 376 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + + S +YG V+ +R+G VVL +TI+Q Sbjct: 377 RKMRKWSNKYGPVMSVRMGRQDWVVLGDHETIQQ 478 >chromat_dir/hrs/G126P60614F.T0/G126P60614FG3.T0.scf Length = 756 Minus Strand HSPs: Score = 127 (44.7 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 26/64 (40%), Positives = 40/64 (62%), Frame = -1 Query: 414 INHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAI 473 +++D K W P F ER L +G + V+ +VI F +G R C+GE +AR E++LFL Sbjct: 594 VHNDPKHWDKPDVFRXERHLDTNGNL--VMLNRVIPFSIGPRNCLGENLARIEIYLFLVW 421 Query: 474 LLQR 477 +LQ+ Sbjct: 420 ILQK 409 >scf/ciona01/G126/seq_dir/hrs/G126P61654R.T0/G126P61654RB4.T0.seq 759 0 759 ABI Length = 759 Plus Strand HSPs: Score = 127 (44.7 bits), Expect = 3.5e-05, P = 3.5e-05 Identities = 28/74 (37%), Positives = 41/74 (55%), Frame = +3 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWE 466 V +N W +++D L+ P EF PER L DG + S+ VI F +G R C+G +A Sbjct: 93 VCINLWGVHNDPCLFDEPGEFRPERHLYEDGKFGR--SDYVISFSVGPRHCLGHQVASMM 266 Query: 467 VFLFLAILLQRVEF 480 +F L L++ EF Sbjct: 267 LFSHLVNLVRNFEF 308 >scf/ciona01/G126/seq_dir/hrs/G126P64672F.T0/G126P64672FA9.T0.seq 768 0 768 ABI Length = 768 Minus Strand HSPs: Score = 127 (44.7 bits), Expect = 3.6e-05, P = 3.6e-05 Identities = 34/94 (36%), Positives = 49/94 (52%), Frame = -3 Query: 1 MLFPISMSATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPH 60 ML I++S T F+ +V L +W R PK PPGP G P +G + LG P Sbjct: 370 MLNEINVS-TSFIFLTVFLGLYYWYRR------PKNF--PPGPRGIPFLGVLPFLGNYPE 218 Query: 61 LALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQ 94 + + S +YG V+ +R+G VVL +TI+Q Sbjct: 217 RKMRKWSNKYGPVMSVRMGRQDWVVLGDHETIQQ 116 >scf/ciona01/G126/seq_dir/hrs/G126P63977F.T0/G126P63977FE7.T0.seq 712 0 712 ABI Length = 712 Minus Strand HSPs: Score = 101 (35.6 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05 Identities = 19/41 (46%), Positives = 28/41 (68%), Frame = -1 Query: 443 LSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVP 483 LS +I F +G R C GE +AR E+F+F+ +LQ+ + SVP Sbjct: 193 LSNNIIPFSVGLRSCPGEQLARQEIFIFVTKILQKFKLSVP 71 Score = 66 (23.2 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05 Identities = 12/31 (38%), Positives = 17/31 (54%), Frame = -2 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDG 437 V+ N W ++D W +PS F P R + DG Sbjct: 294 VYANIWGAHNDPVAWPDPSRFDPYRHIDKDG 202 >chromat_dir/hrs/G126P60246F.T0/G126P60246FC8.T0.scf Length = 737 Minus Strand HSPs: Score = 115 (40.5 bits), Expect = 0.00010, Sum P(2) = 0.00010 Identities = 27/71 (38%), Positives = 39/71 (54%), Frame = -2 Query: 410 NQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFL 469 N+W + D +W PS+F E P + V S V+ F +G R C+GE +AR EVF+ Sbjct: 304 NRWAAHKDLDVWNEPSKF--EL*RHPHDKGNFVQSSHVLPFSVGPRHCLGEQLARMEVFI 131 Query: 470 FLAILLQRVEF 480 L L+Q+ F Sbjct: 130 DLVSLVQKFXF 98 Score = 47 (16.5 bits), Expect = 0.00010, Sum P(2) = 0.00010 Identities = 10/26 (38%), Positives = 16/26 (61%), Frame = -2 Query: 361 DR-SHLPYMEAFILETFRHSSFVPFT 385 DR S++PY A + + +R + V FT Sbjct: 514 DR*SNMPYTSALMQKVYRFRTLVAFT 437 >chromat_dir/hrs/G126P6018F.T0/G126P6018FH8.T0.scf Length = 720 Minus Strand HSPs: Score = 119 (41.9 bits), Expect = 0.00026, P = 0.00026 Identities = 25/57 (43%), Positives = 34/57 (59%), Frame = -1 Query: 424 PSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEF 480 P F+P+R L PDG V S+ ++ FG G R C+GE +AR E+FL LQ + F Sbjct: 243 PXLFIPDRHLDPDGNF--VSSKYILPFGAGVRSCLGENLARAELFLVFVATLQNLAF 79 >scf/ciona01/G126/seq_dir/hrs/G126P60866F.T0/G126P60866FE2.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0013, P = 0.0013 Identities = 24/69 (34%), Positives = 41/69 (59%), Frame = +2 Query: 291 EKQLDENANVQLSDE----KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEE 346 +KQL E LS+ ++ + D+F AG +T T+ I W+L YL+ +P +Q K+ E Sbjct: 140 KKQLSEFKVTILSNSFQKTQLQYFLKDIFAAGTETSTSTIIWALYYLIRHPEIQDKVHRE 319 Query: 347 LDTVIGRSR 355 +D +G++R Sbjct: 320 IDAELGKAR 346 >chromat_dir/hrs/G126P60021F.T0/G126P60021FE1.T0.scf Length = 772 Plus Strand HSPs: Score = 113 (39.8 bits), Expect = 0.0014, P = 0.0014 Identities = 28/78 (35%), Positives = 40/78 (51%), Frame = +3 Query: 17 VIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQI 76 V F +W R PK PPGP G P +G + LG +P + S++YG V+ + Sbjct: 30 VXFAFFYWYRR------PKNF--PPGPRGVPFLGVLPFLGNHPASKMRTWSKKYGPVMSV 185 Query: 77 RIGSTPVVVLSGLDTIRQ 94 R+G VVL +TI+Q Sbjct: 186 RMGRQDWVVLGDYETIQQ 239 >scf/ciona01/G126/seq_dir/hrs/G126P61537F.T0/G126P61537FD1.T0.seq 721 0 721 ABI Length = 721 Minus Strand HSPs: Score = 111 (39.1 bits), Expect = 0.0021, P = 0.0021 Identities = 28/86 (32%), Positives = 43/86 (50%), Frame = -3 Query: 9 ATEFLLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQ 68 +T F++ +V L +W R PK PPGP G P +G + LG + + S+ Sbjct: 287 STGFVVLTVFLALYYWYRR------PKNY--PPGPRGIPFLGVLPFLGNYAERTMHKWSK 132 Query: 69 QYGDVLQIRIGSTPVVVLSGLDTIRQ 94 +YG V+ +R+G V +TIRQ Sbjct: 131 KYGPVMSVRMGRQDWVFFGDHETIRQ 54 >chromat_dir/hrs/G126P60080R.T0/G126P60080RC3.T0.scf Length = 729 Plus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.0024, Sum P(2) = 0.0024 Identities = 17/45 (37%), Positives = 28/45 (62%), Frame = +3 Query: 342 KIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTI 386 K+Q+E+D ++G + P+ DR +PY EA +LE R ++ P I Sbjct: 156 KVQQEIDNILGLDQVPKYEDRLKMPYCEATLLEVQRFATIAPIGI 290 Score = 55 (19.4 bits), Expect = 0.0024, Sum P(2) = 0.0024 Identities = 7/15 (46%), Positives = 14/15 (93%), Frame = +2 Query: 326 ISWSLMYLVMNPRVQ 340 +SW+++Y+V NP++Q Sbjct: 47 LSWAVLYMVNNPKIQ 91 >scf/ciona01/G126/seq_dir/hrs/G126P64409F.T0/G126P64409FD7.T0.seq 743 0 743 ABI Length = 743 Plus Strand HSPs: Score = 108 (38.0 bits), Expect = 0.0050, P = 0.0050 Identities = 30/96 (31%), Positives = 47/96 (48%), Frame = +3 Query: 382 VPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDK 441 VPF I TT + S+ IP G V + ++H+ +W + F P+RFL P+ + + Sbjct: 72 VPF-IGRVTTEECSVGSHTIPAGTQVAIFIDSLHHNPSVWPDVDRFDPDRFL-PENCVGR 245 Query: 442 VLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQR 477 I F G R CIG+ A E + L +L++ Sbjct: 246 H-PYSFIPFSAGPRNCIGQKFALMEEKVLLTQILRK 350 >scf/ciona01/G126/seq_dir/hrs/G126P64027F.T0/G126P64027FF11.T0.seq 760 0 760 ABI Length = 760 Minus Strand HSPs: Score = 107 (37.7 bits), Expect = 0.0066, P = 0.0066 Identities = 18/52 (34%), Positives = 31/52 (59%), Frame = -2 Query: 357 PRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVF 408 P + + +LP + AFI E +R+ + P +I H T+ D + G++IPK V+ Sbjct: 495 PSVDHKDNLPLLRAFIQEVYRYQTIKPLSIKHRTSEDVEIGGYFIPKDTTVW 340 >scf/ciona01/G126/seq_dir/hrs/G126P64029F.T0/G126P64029FE10.T0.seq 726 0 726 ABI Length = 726 Minus Strand HSPs: Score = 106 (37.3 bits), Expect = 0.0081, P = 0.0081 Identities = 19/38 (50%), Positives = 30/38 (78%), Frame = -3 Query: 442 VLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVE 479 V ++K+I FG+G R C+GE +A+ EVFLFL+ +++R E Sbjct: 682 VFNKKIIPFGIGARSCLGEKLAKLEVFLFLSNIIRRFE 569 >scf/ciona01/G126/seq_dir/hrs/G126P64003F.T0/G126P64003FA9.T0.seq 746 0 746 ABI Length = 746 Minus Strand HSPs: Score = 101 (35.6 bits), Expect = 0.031, P = 0.031 Identities = 19/59 (32%), Positives = 36/59 (61%), Frame = -2 Query: 65 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSF 123 ++ +YG ++ +++ VVL+ +++I +ALV+QG F GRPD F + G+ S+ Sbjct: 472 KIGWKYGPIVGVKLLRKFTVVLNSVESINEALVKQGHIFSGRPDSIMFQAFTGGRGTSY 296 >scf/ciona01/G126/seq_dir/hrs/G126P64616F.T0/G126P64616FD5.T0.seq 735 0 735 ABI Length = 735 Plus Strand HSPs: Score = 98 (34.5 bits), Expect = 0.067, P = 0.065 Identities = 18/45 (40%), Positives = 28/45 (62%), Frame = +1 Query: 342 KIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTI 386 K+Q+E+D ++G + P+ DR +PY EA ILE R ++ P I Sbjct: 181 KVQQEIDNILGLDQVPKYEDRLKMPYCEATILEVQRFATIAPIGI 315 >scf/ciona01/G126/seq_dir/hrs/G126P61625R.T0/G126P61625RG7.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 97 (34.1 bits), Expect = 0.084, P = 0.081 Identities = 20/53 (37%), Positives = 30/53 (56%), Frame = +2 Query: 40 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTI 92 PPGP G P G + LG +P + S++YG V+ +R+G VVL +T+ Sbjct: 65 PPGPRGIPFFGVLPFLGYHPASKMRTWSKKYGPVMSVRMGRQDWVVLGDFETL 223 >scf/ciona01/G126/seq_dir/hrs/G126P64016R.T0/G126P64016RG3.T0.seq 742 0 742 ABI Length = 742 Minus Strand HSPs: Score = 97 (34.1 bits), Expect = 0.087, P = 0.083 Identities = 21/52 (40%), Positives = 33/52 (63%), Frame = -3 Query: 302 LSDEK-IINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 352 LS +K +++ + DLF AG +T T I W L+ L+ P +Q K+ +E+ VIG Sbjct: 701 LSQKKQLLHCLGDLFNAGTETSTNVILWMLLALMHYPDIQEKLYQEIHDVIG 546 >scf/ciona01/G126/seq_dir/hrs/G126P64056F.T0/G126P64056FH4.T0.seq 758 0 758 ABI Length = 758 Plus Strand HSPs: Score = 97 (34.1 bits), Expect = 0.089, P = 0.085 Identities = 25/76 (32%), Positives = 41/76 (53%), Frame = +2 Query: 313 DLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS-RRPR---LSDRSHLPYM 368 DLFGA DT+T A++W ++Y + Q + QEE+D + + PR L + Sbjct: 332 DLFGANVDTMTVALAWMIVYWSTYHQAQTRAQEEIDRFVETNFHLPRYFLLIVFFIYIFF 511 Query: 369 EAFILETFRHSSFVPFT 385 + ++F H++ VPFT Sbjct: 512 RVIMFKSFAHTT-VPFT 559 >chromat_dir/hrs/G126P60606F.T0/G126P60606FB4.T0.scf Length = 751 Plus Strand HSPs: Score = 72 (25.3 bits), Expect = 0.10, Sum P(2) = 0.096 Identities = 12/32 (37%), Positives = 18/32 (56%), Frame = +1 Query: 376 FRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCV 407 +R+ + PF + H T D +L G+ IP G V Sbjct: 52 YRYRTLAPFGVAHMTNEDVNLNGYSIPNGTTV 147 Score = 66 (23.2 bits), Expect = 0.10, Sum P(2) = 0.096 Identities = 10/31 (32%), Positives = 19/31 (61%), Frame = +3 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDG 437 ++VN W ++++ +W P++ PER L G Sbjct: 561 IYVNLWAVHNNPDVWDEPNKVKPERHLQDKG 653 >scf/ciona01/G126/seq_dir/hrs/G126P64022F.T0/G126P64022FA5.T0.seq 755 0 755 ABI Length = 755 Plus Strand HSPs: Score = 96 (33.8 bits), Expect = 0.11, P = 0.11 Identities = 20/54 (37%), Positives = 33/54 (61%), Frame = +2 Query: 40 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YGDVLQIRIGSTPVVVLSGLDTI 92 PPG G P++G + GK+ H + + S++ YG ++ IR+G +VL+ DTI Sbjct: 182 PPGVRGVPVLGALPFFGKSAHNTILQWSREKYGKIMSIRMGPNHALVLNDYDTI 343 >scf/ciona01/G126/seq_dir/hrs/G126P63965F.T0/G126P63965FA12.T0.seq 722 0 722 ABI Length = 722 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.14, P = 0.13 Identities = 18/55 (32%), Positives = 34/55 (61%), Frame = +2 Query: 65 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQ 119 ++ +YG ++ +++ VVL+ +++I +ALV+QG F GRPD F + G+ Sbjct: 503 KIGWKYGPIVGVKLLRKFTVVLNSVESINEALVKQGHIFSGRPDSIMFQAFTGGR 667 >scf/ciona01/G126/seq_dir/hrs/G126P64410F.T0/G126P64410FE11.T0.seq 752 0 752 ABI Length = 752 Plus Strand HSPs: Score = 95 (33.4 bits), Expect = 0.15, P = 0.14 Identities = 17/48 (35%), Positives = 31/48 (64%), Frame = +3 Query: 306 KIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGR 353 +++ + DLF AG +T T+ W+L+ ++ P Q K++EE+ VIG+ Sbjct: 249 QLMQYLRDLFEAGSETTTSTTRWALLCMLHYPETQEKLREEIMNVIGK 392 >scf/ciona01/G126/seq_dir/hrs/G126P64789F.T0/G126P64789FE9.T0.seq 742 0 742 ABI Length = 742 Minus Strand HSPs: Score = 93 (32.7 bits), Expect = 0.24, P = 0.22 Identities = 20/57 (35%), Positives = 35/57 (61%), Frame = -1 Query: 305 EKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSD 361 +++I+ + DLF G T A+ W+L+ L+ +P Q K++ E+ V+GR RLS+ Sbjct: 541 DQLIHYISDLFICGTITTAGALRWALLCLLHHPDKQDKMRREIIEVLGRKGIERLSE 371 >scf/ciona01/G126/seq_dir/hrs/G126P63017F.T0/G126P63017FB2.T0.seq 727 0 727 ABI Length = 727 Plus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.40, P = 0.33 Identities = 17/47 (36%), Positives = 29/47 (61%), Frame = +1 Query: 453 GKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK-VDMTPIYGLTM 498 G R C+G +A+ E+FLF + Q+ +VP G +D P++G+T+ Sbjct: 256 GLRICVGMNVAKQELFLFFVAMFQKFSMNVPDGKDYIDDAPLHGVTL 396 >scf/ciona01/G126/seq_dir/hrs/G126P64609R.T0/G126P64609RB4.T0.seq 744 0 744 ABI Length = 744 Plus Strand HSPs: Score = 91 (32.0 bits), Expect = 0.41, P = 0.34 Identities = 17/47 (36%), Positives = 29/47 (61%), Frame = +3 Query: 453 GKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK-VDMTPIYGLTM 498 G R C+G +A+ E+FLF + Q+ +VP G +D P++G+T+ Sbjct: 270 GLRICVGMNVAKQELFLFFVAMFQKFSMNVPDGKDFIDDAPLHGVTL 410 >scf/ciona01/G126/seq_dir/hrs/G126P64401F.T0/G126P64401FH9.T0.seq 724 0 724 ABI Length = 724 Minus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.67, P = 0.49 Identities = 48/215 (22%), Positives = 93/215 (43%), Frame = -1 Query: 84 VVLSGLDTIRQALVRQGDDFKGRPDLYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLK 143 +VL + +ALV+ RP + + G+ + +SG +RR N L+ Sbjct: 724 LVLGSYEAAHEALVKN-THIADRPT-HNIEVFYGGKGILMI-NSGSFHQEQRRFGLNTLR 554 Query: 144 SFSIASDPASSTSC-YLEEHVSKEAEVLISTLQELMAGPGHFNPYRYVVVSVTNVICAIC 202 + + T Y+ + L +++ + P + Y+ +S T I I Sbjct: 553 EYGMGRRALEPTILIYVND--------LCDRIEKYGSDPFVIDGEVYLTISST--ISHIV 404 Query: 203 FGRRYDHNHQELLSLV--NLNNNFGEVVGSGNPADFIPILRYLPNPSL--NAFKDLNEKF 258 FG H++ + ++ + N V+ +G A F P L++ P S + K+ K Sbjct: 403 FGHDVIHDNPKFKEIIFKMIEPNKLNVL-AGILA-FAPFLKHFPFFSTVHKSSKEFRLKL 230 Query: 259 YSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENA 298 S + + V+EH KT + RD DS ++ ++ + +N+ Sbjct: 229 QSLIGEEVQEHKKTRDPTQSRDFIDSFLQAMEKTERSKNS 110 >scf/ciona01/G126/seq_dir/hrs/G126P64523F.T0/G126P64523FE3.T0.seq 732 0 732 ABI Length = 732 Plus Strand HSPs: Score = 89 (31.3 bits), Expect = 0.68, P = 0.49 Identities = 18/56 (32%), Positives = 32/56 (57%), Frame = +3 Query: 40 PPGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YGDVLQIRIGSTPVVVLSGLDTIRQ 94 PPG G P++G G+ P +++ S++ YG V+ +R G VVL+ ++I + Sbjct: 342 PPGVRGIPILGATPFFGRYPQETIAKWSREKYGPVMSVRFGQQDAVVLNDYESIHE 509 >scf/ciona01/G126/seq_dir/hrs/G126P61625F.T0/G126P61625FC12.T0.seq 708 0 708 ABI Length = 708 Minus Strand HSPs: Score = 88 (31.0 bits), Expect = 0.85, P = 0.57 Identities = 20/52 (38%), Positives = 32/52 (61%), Frame = -3 Query: 442 VLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVDMTPI 493 + S KVI FG+G R CIGE +A + LF+A +++ E +P +K +P+ Sbjct: 241 ISSRKVIPFGIGARSCIGEKMASMPISLFVANIIKAFEI-LPDPLKKPHSPL 89 >scf/ciona01/G126/seq_dir/hrs/G126P64515F.T0/G126P64515FA1.T0.seq 781 0 781 ABI Length = 781 Minus Strand HSPs: Score = 87 (30.6 bits), Expect = 1.2, P = 0.70 Identities = 20/47 (42%), Positives = 29/47 (61%), Frame = -3 Query: 436 DGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 482 DG + S +V F +G RKC+G +A+ E+FLF A +L+ EF V Sbjct: 779 DGDGKFIPSNRVFPFPVGHRKCLGVQLAKAELFLFYAGVLKHHEFQV 639 >scf/ciona01/G126/seq_dir/hrs/G126P64537F.T0/G126P64537FG2.T0.seq 779 0 779 ABI Length = 779 Minus Strand HSPs: Score = 86 (30.3 bits), Expect = 1.6, P = 0.79 Identities = 27/93 (29%), Positives = 49/93 (52%), Frame = -1 Query: 6 SMSATEFLLASVIFCLVFWVI-RASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALS 64 S+SA V C++F++I R S+ + L+ PPGP ++ + L +NP + Sbjct: 308 SISAVYQGYVFVSCCILFFIIYRGSKE---RRLRLPPGPSLLYMMVALPRLIQNPERTIR 138 Query: 65 RMSQQYGDVLQIRIGSTPVVVLSGLDTIRQALVR 98 QYG ++ +R+ + +V L+ +TI+ A R Sbjct: 137 HWCAQYGPLVTVRLFNRNIVYLNTQETIKAAF*R 36 >scf/ciona01/G126/seq_dir/hrs/G126P64657F.T0/G126P64657FH8.T0.seq 753 0 753 ABI Length = 753 Plus Strand HSPs: Score = 82 (28.9 bits), Expect = 4.2, P = 0.99 Identities = 16/47 (34%), Positives = 28/47 (59%), Frame = +3 Query: 453 GKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVK-VDMTPIYGLTM 498 G R C+G +A+ E+FLF + Q+V + P G +D ++G+T+ Sbjct: 606 GLRICVGMNVAKQELFLFFVAMFQKVSMNCPDGKDYIDDAXLHGVTL 746 >chromat_dir/hrs/G126P6005F.T0/G126P6005FG5.T0.scf Length = 714 Plus Strand HSPs: Score = 68 (23.9 bits), Expect = 6.2, Sum P(2) = 1.00 Identities = 15/48 (31%), Positives = 27/48 (56%), Frame = +2 Query: 295 DENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRK 342 DE A+ + ++ + V +LF G DT TA+ W+L+ + P + +K Sbjct: 572 DETAS-WWNKYQLFHYVKELFLGGTDTTATALRWALLLIHTYPEIAKK 712 Score = 52 (18.3 bits), Expect = 6.2, Sum P(2) = 1.00 Identities = 12/55 (21%), Positives = 24/55 (43%), Frame = +3 Query: 241 RYLP--NPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQ 293 R++P ++ K ++ + ++EH T+ + RD D I +E Q Sbjct: 102 RFIPPWKGKIDNVKKERAPMWNMITNAIEEHEATYNENSCRDFIDCFIAKMKEAQ 266 >scf/ciona01/G126/seq_dir/hrs/G126P64716F.T0/G126P64716FC11.T0.seq 1000 0 1000 ABI Length = 1000 Minus Strand HSPs: Score = 81 (28.5 bits), Expect = 6.6, P = 1.00 Identities = 19/56 (33%), Positives = 33/56 (58%), Frame = -1 Query: 407 VFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETI 462 +F N ++ D+K + +P+EF R + DG V ++KV+ FG+G C+GE + Sbjct: 193 IFTNIDAVHKDEKTFKSPNEFNIYRHIV-DGKF--VSNKKVMPFGIGASSCLGEEL 35 >scf/ciona01/G126/seq_dir/hrs/G126P64020F.T0/G126P64020FA5.T0.seq 730 0 730 ABI Length = 730 Plus Strand HSPs: Score = 80 (28.2 bits), Expect = 6.9, P = 1.00 Identities = 22/73 (30%), Positives = 37/73 (50%), Frame = +3 Query: 13 LLASVIFCLVFWVIRASRPQVPKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQ-YG 71 L+ V FC++ + P P PPG G P++G + GK H + + S++ YG Sbjct: 108 LIGLVTFCMLLYQYWWKFPH-PC---YPPGVRGVPVLGALPFFGKFAHKTILQWSREKYG 275 Query: 72 DVLQIRIGSTPVVV 85 ++ +R+G VV Sbjct: 276 KIMSVRMGPNDAVV 317 Parameters: ctxfactor=6.00 E=10 Query ----- As Used ----- ----- Computed ---- Frame MatID Matrix name Lambda K H Lambda K H +0 0 BLOSUM62 0.323 0.139 0.426 same same same Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a Query Frame MatID Length Eff.Length E S W T X E2 S2 +0 0 512 512 10. 74 3 13 22 0.065 37 35 0.063 42 Statistics: Database: /seqs/databases/ciona/ciona_00.seq Title: /seqs/databases/ciona/ciona_00.seq Release date: unknown Posted date: 2:59 AM CST Mar 31, 2002 Format: BLAST # of letters in database: 77,897,945 # of sequences in database: 99,999 # of database sequences satisfying E: 54 No. of states in DFA: 554 (59 KB) Total size of DFA: 108 KB (128 KB) Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00 No. of threads or processors used: 2 Search cpu time: 13.66u 0.05s 13.71t Elapsed: 00:00:14 Total cpu time: 13.69u 0.07s 13.76t Elapsed: 00:00:14 Start: Mon Apr 1 21:35:23 2002 End: Mon Apr 1 21:35:37 2002